RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PHGDHO43175 533 aaKnown RBP10.38□□□□□ -0.75
PTPRA-203ENST00000356147 TMCC1O94876 653 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 TPH1P17752 444 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 TGM2P21980 687 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 NIPAL4Q0D2K0 466 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 LSM12Q3MHD2 195 aaKnown RBP10.38□□□□□ -0.75
PTPRA-203ENST00000356147 BOLA3Q53S33 107 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 MPZL3Q6UWV2 235 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 STRA8Q7Z7C7 330 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 TTC30AQ86WT1 665 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 CDKL3Q8IVW4 592 aaPredicted RBP10.38□□□□□ -0.75
PTPRA-203ENST00000356147 RAB3IL1Q8TBN0 382 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 KHSRPQ92945 711 aaKnown RBP eCLIP10.38□□□□□ -0.754e-7■■■□□ 17.5
PTPRA-203ENST00000356147 ITFG2Q969R8 447 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 ATP6V1E2Q96A05 226 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 BCO2Q9BYV7 579 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 NRBP2Q9NSY0 501 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 MAP3K20Q9NYL2 800 aaKnown RBP10.38□□□□□ -0.75
PTPRA-203ENST00000356147 PTTG2Q9NZH5 202 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 UBP1Q9NZI7 540 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 DCDC2Q9UHG0 476 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 TMCO1Q9UM00 188 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 AP4E1Q9UPM8 1137 aa10.38□□□□□ -0.75
PTPRA-203ENST00000356147 A0A096LPK6 155 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 CASQ2O14958 399 aaPredicted RBP10.37□□□□□ -0.75
PTPRA-203ENST00000356147 RNASEH2AO75792 299 aaKnown RBP10.37□□□□□ -0.75
PTPRA-203ENST00000356147 MT-CO1P00395 513 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 STAG3L1P0CL83 205 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 PITX1P78337 314 aaPredicted RBP10.37□□□□□ -0.75
PTPRA-203ENST00000356147 ZNF460Q14592 562 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 TARBP2Q15633 366 aaKnown RBP10.37□□□□□ -0.75
PTPRA-203ENST00000356147 RARS2Q5T160 578 aaKnown RBP10.37□□□□□ -0.75
PTPRA-203ENST00000356147 DUS1LQ6P1R4 473 aaKnown RBP10.37□□□□□ -0.75
PTPRA-203ENST00000356147 EPGNQ6UW88 154 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 LAYNQ6UX15 382 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 TSHZ1Q6ZSZ6 1077 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 MARVELD2Q8N4S9 558 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 MCUQ8NE86 351 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 HTR3CQ8WXA8 447 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 RTP4Q96DX8 246 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 MFSD3Q96ES6 412 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 SGF29Q96ES7 293 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 CDHR1Q96JP9 859 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 KCTD15Q96SI1 283 aaPredicted RBP10.37□□□□□ -0.75
PTPRA-203ENST00000356147 SUDS3Q9H7L9 328 aaPredicted RBP10.37□□□□□ -0.75
PTPRA-203ENST00000356147 ACAD9Q9H845 621 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 CAAP1Q9H8G2 361 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 ADA2Q9NZK5 511 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 SNX9Q9Y5X1 595 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 MGAMO43451 1857 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 TMX2-CTNND1H3BSU7 103 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 RNF103O00237 685 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 PPEF2O14830 753 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 MFSD11O43934 449 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 MAFO75444 373 aaPredicted RBP10.37□□□□□ -0.75
PTPRA-203ENST00000356147 FARP2O94887 1054 aaPredicted RBP10.37□□□□□ -0.75
PTPRA-203ENST00000356147 ADORA2BP29275 332 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 TMEM62Q0P6H9 643 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 ADGRE1Q14246 886 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 FSTL4Q6MZW2 842 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 CYP2R1Q6VVX0 501 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 BNC2Q6ZN30 1099 aaPredicted RBP10.37□□□□□ -0.75
PTPRA-203ENST00000356147 FAM83AQ86UY5 434 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 MYO1HQ8N1T3 1032 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 KYQ8NBH2 561 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 REPS2Q8NFH8 660 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 RIN3Q8TB24 985 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 PPP1R13LQ8WUF5 828 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 LRRC39Q96DD0 335 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 TEPSINQ96N21 525 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 CSPG4P5Q96PW8 444 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 OMDQ99983 421 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 CCDC28BQ9BUN5 200 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 SLC4A5Q9BY07 1137 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 C20orf96Q9NUD7 363 aaPredicted RBP10.37□□□□□ -0.75
PTPRA-203ENST00000356147 GMPR2Q9P2T1 348 aaKnown RBP10.37□□□□□ -0.75
PTPRA-203ENST00000356147 STK39Q9UEW8 545 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 RIMS3Q9UJD0 308 aa10.37□□□□□ -0.75
PTPRA-203ENST00000356147 PIGNO95427 931 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 PDGFRBP09619 1106 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 MX2P20592 715 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 GRK2P25098 689 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 STT3AP46977 705 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 RABGGTBP53611 331 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 NAGLUP54802 743 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 BACE1P56817 501 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 CXCL9Q07325 125 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 RALGDSQ12967 914 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 PDK2Q15119 407 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 IL23RQ5VWK5 629 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 OLFML1Q6UWY5 402 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 TIFABQ6ZNK6 161 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 RPS27LQ71UM5 84 aaKnown RBP10.36□□□□□ -0.75
PTPRA-203ENST00000356147 PNPLA1Q8N8W4 532 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 FAM110BQ8TC76 370 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 COPS5Q92905 334 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 BTBD9Q96Q07 612 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 MRPL45Q9BRJ2 306 aaKnown RBP10.36□□□□□ -0.75
PTPRA-203ENST00000356147 NIFKQ9BYG3 293 aaKnown RBP10.36□□□□□ -0.75
PTPRA-203ENST00000356147 GBA2Q9HCG7 927 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms