RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 RFX8Q6ZV50 586 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 NT5DC3Q86UY8 548 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 CIR1Q86X95 450 aaPredicted RBP16■□□□□ 0.15
TRIM13-201ENST00000356017 VSIG1Q86XK7 387 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 REXO1L1PQ8IX06 675 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 CCDC26Q8TAB7 109 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 TRIM44Q96DX7 344 aaPredicted RBP16■□□□□ 0.15
TRIM13-201ENST00000356017 COL25A1Q9BXS0 654 aaPredicted RBP16■□□□□ 0.15
TRIM13-201ENST00000356017 MFSD1Q9H3U5 465 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 PCDH18Q9HCL0 1135 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 TMEM248Q9NWD8 314 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 CWC15Q9P013 229 aaKnown RBP16■□□□□ 0.15
TRIM13-201ENST00000356017 PYCARDQ9ULZ3 195 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 TICRRQ7Z2Z1 1910 aa16■□□□□ 0.15
TRIM13-201ENST00000356017 CNTN5O94779 1100 aa15.99■□□□□ 0.15
TRIM13-201ENST00000356017 KAT7O95251 611 aa15.99■□□□□ 0.15
TRIM13-201ENST00000356017 GOT1P17174 413 aa15.99■□□□□ 0.15
TRIM13-201ENST00000356017 CTNNA1P35221 906 aaKnown RBP15.99■□□□□ 0.15
TRIM13-201ENST00000356017 MAPKAPK2P49137 400 aa15.99■□□□□ 0.15
TRIM13-201ENST00000356017 IRAK1P51617 712 aa15.99■□□□□ 0.15
TRIM13-201ENST00000356017 PON2Q15165 354 aa15.99■□□□□ 0.15
TRIM13-201ENST00000356017 FBXO43Q4G163 708 aa15.99■□□□□ 0.15
TRIM13-201ENST00000356017 UBL4BQ8N7F7 174 aa15.99■□□□□ 0.15
TRIM13-201ENST00000356017 TERB1Q8NA31 727 aa15.99■□□□□ 0.15
TRIM13-201ENST00000356017 ZNF670Q9BS34 389 aa15.99■□□□□ 0.15
TRIM13-201ENST00000356017 CALN1Q9BXU9 219 aa15.99■□□□□ 0.15
TRIM13-201ENST00000356017 OSBPL6Q9BZF3 934 aa15.99■□□□□ 0.15
TRIM13-201ENST00000356017 TRMT1Q9NXH9 659 aaKnown RBP15.99■□□□□ 0.15
TRIM13-201ENST00000356017 CLEC4EQ9ULY5 219 aa15.99■□□□□ 0.15
TRIM13-201ENST00000356017 NEU3Q9UQ49 428 aa15.99■□□□□ 0.15
TRIM13-201ENST00000356017 PCDHA3Q9Y5H8 950 aa15.99■□□□□ 0.15
TRIM13-201ENST00000356017 COL4A2P08572 1712 aa15.99■□□□□ 0.15
TRIM13-201ENST00000356017 LRRD1A4D1F6 860 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 TBC1D3BA6NDS4 549 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 SHISA7A6NL88 538 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 WASH4PA8MWX3 477 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 ZNF487B1APH4 448 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 STK25O00506 426 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 NCAM2O15394 837 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 TIMM44O43615 452 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 CD72P21854 359 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 KDELR1P24390 212 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 MSNP26038 577 aaKnown RBP15.98■□□□□ 0.15
TRIM13-201ENST00000356017 CTNNA2P26232 953 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 HLA-FP30511 346 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 ARSEP51690 589 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 DMC1Q14565 340 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 E2F5Q15329 346 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 ZNF783Q6ZMS7 281 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 ANKS1BQ7Z6G8 1248 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 TFAP2DQ7Z6R9 452 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 NLRP14Q86W24 1093 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 KATNAL2Q8IYT4 538 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 AHI1Q8N157 1196 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 PHTF2Q8N3S3 785 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.98■□□□□ 0.15
TRIM13-201ENST00000356017 RTL3Q8N8U3 475 aaKnown RBP15.98■□□□□ 0.15
TRIM13-201ENST00000356017 WFIKKN2Q8TEU8 576 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 CSPG4P5Q96PW8 444 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 TBC1D17Q9HA65 648 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 ABCB8Q9NUT2 735 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 GGA2Q9UJY4 613 aa15.98■□□□□ 0.15
TRIM13-201ENST00000356017 ZRANB2O95218 330 aaKnown RBP eCLIP15.97■□□□□ 0.15
TRIM13-201ENST00000356017 KRT1P04264 644 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 PABPC1P11940 636 aaKnown RBP15.97■□□□□ 0.15
TRIM13-201ENST00000356017 ETFBP38117 255 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 TNFRSF4P43489 277 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 KDSRQ06136 332 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 DPYSL3Q14195 570 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 EIF4HQ15056 248 aaKnown RBP15.97■□□□□ 0.15
TRIM13-201ENST00000356017 DGKKQ5KSL6 1271 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 KIAA0907Q7Z7F0 614 aaPredicted RBP15.97■□□□□ 0.15
TRIM13-201ENST00000356017 RCOR2Q8IZ40 523 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 SYNPOQ8N3V7 929 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 EXD1Q8NHP7 514 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 RAPGEF5Q92565 580 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 TSC1Q92574 1164 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 RBM41Q96IZ5 413 aaKnown RBP15.97■□□□□ 0.15
TRIM13-201ENST00000356017 PRDM16Q9HAZ2 1276 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 FBRSL1Q9HCM7 1045 aaKnown RBP15.97■□□□□ 0.15
TRIM13-201ENST00000356017 LTB4R2Q9NPC1 389 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 KCND1Q9NSA2 647 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 ZNF212Q9UDV6 495 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 NDRG2Q9UN36 371 aaKnown RBP15.97■□□□□ 0.15
TRIM13-201ENST00000356017 ILVBLA1L0T0 632 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 TMEM221A6NGB7 291 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 FAM170BA6NMN3 283 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 M0R296 226 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 KIF5CO60282 957 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 FTCDO95954 541 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 RHOCP08134 193 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 ERCC2P18074 760 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 PLK1P53350 603 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 RWDD2BP57060 319 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 LMAN2Q12907 356 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 DPYSQ14117 519 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 LRRC32Q14392 662 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 UBXN2BQ14CS0 331 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 FSCBQ5H9T9 825 aa15.97■□□□□ 0.15
TRIM13-201ENST00000356017 NAIF1Q69YI7 327 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms