RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 FAM117BQ6P1L5 589 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 DARS2Q6PI48 645 aaKnown RBP8.03□□□□□ -1.12
CD46-203ENST00000354848 BTLAQ7Z6A9 289 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 C14orf80Q86SX3 495 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 RFX6Q8HWS3 928 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 HERC6Q8IVU3 1022 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 RAVER1Q8IY67 606 aaKnown RBP8.03□□□□□ -1.12
CD46-203ENST00000354848 AGR3Q8TD06 166 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 DEPDC1BQ8WUY9 529 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 ZNF516Q92618 1163 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 SLCO4A1Q96BD0 722 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 PGBD4Q96DM1 585 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 ASB9Q96DX5 294 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 TMA16Q96EY4 203 aaKnown RBP8.03□□□□□ -1.12
CD46-203ENST00000354848 CEP44Q9C0F1 390 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 ST6GALNAC4Q9H4F1 302 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 SERPINB13Q9UIV8 391 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 PCDHB12Q9Y5F1 795 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 CDY2AQ9Y6F7 541 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 CDY1Q9Y6F8 540 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 WDR64B1ANS9 1081 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 C9IYK1 514 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 PIK3R2O00459 728 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 TRIM38O00635 465 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 GCATO75600 419 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 CLPXO76031 633 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 BCL10O95999 233 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 SLURP2P0DP57 97 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 MYF6P23409 242 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 IDUAP35475 653 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 UBXN2AP68543 259 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 RHDQ02161 417 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 SELENBP1Q13228 472 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 WDR44Q5JSH3 913 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 SLC10A5Q5PT55 438 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 ZNF618Q5T7W0 954 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 AGAP7PQ5VUJ5 663 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 SLFN13Q68D06 897 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 PPP4R4Q6NUP7 873 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 NPNTQ6UXI9 565 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 CHSY3Q70JA7 882 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 USP37Q86T82 979 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 THNSL1Q8IYQ7 743 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 ARFGAP1Q8N6T3 406 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 NIPA2Q8N8Q9 360 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 FBXL18Q96ME1 805 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 PCDHAC1Q9H158 963 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 WDR55Q9H6Y2 383 aaPredicted RBP8.03□□□□□ -1.12
CD46-203ENST00000354848 NANOGQ9H9S0 305 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 C20orf96Q9NUD7 363 aaPredicted RBP8.03□□□□□ -1.12
CD46-203ENST00000354848 SMOXQ9NWM0 555 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 TMEM216Q9P0N5 145 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 TMEM9Q9P0T7 183 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 NXF1Q9UBU9 619 aaKnown RBP8.03□□□□□ -1.12
CD46-203ENST00000354848 SEPT3Q9UH03 358 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 DCDC2Q9UHG0 476 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 IFT52Q9Y366 437 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 ST14Q9Y5Y6 855 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 NEMP1O14524 444 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 NOL3O60936 208 aaKnown RBP8.03□□□□□ -1.12
CD46-203ENST00000354848 JRKO75564 520 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 MYO1DO94832 1006 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 CALB1P05937 261 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 NR4A1P22736 598 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 HNRNPFP52597 415 aaKnown RBP8.03□□□□□ -1.12
CD46-203ENST00000354848 MRPS9P82933 396 aaKnown RBP8.03□□□□□ -1.12
CD46-203ENST00000354848 GRSF1Q12849 480 aaKnown RBP eCLIP8.03□□□□□ -1.12
CD46-203ENST00000354848 PTK2BQ14289 1009 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 PERM1Q5SV97 790 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 RSBN1LQ6PCB5 846 aaPredicted RBP8.03□□□□□ -1.12
CD46-203ENST00000354848 KCNT2Q6UVM3 1135 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 C15orf39Q6ZRI6 1047 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 CYP2U1Q7Z449 544 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 TMCO5AQ8N6Q1 288 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 ACMSDQ8TDX5 336 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 PPP1R36Q96LQ0 422 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 ZNF577Q9BSK1 485 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 WDR11Q9BZH6 1224 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 EFCAB1Q9HAE3 211 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 TMA7Q9Y2S6 64 aaKnown RBP8.03□□□□□ -1.12
CD46-203ENST00000354848 TRAF6Q9Y4K3 522 aa8.03□□□□□ -1.12
CD46-203ENST00000354848 SPDYE2BA6NHP3 402 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 DDX39AO00148 427 aaKnown RBP8.02□□□□□ -1.13
CD46-203ENST00000354848 DLGAP1O14490 977 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 LRCH4O75427 683 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 HSPA4LO95757 839 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 HLA-DRAP01903 254 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 SPDYE6P0CI01 402 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 ARP10275 920 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 PROZP22891 400 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 CNTFP26441 200 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 HOXA10P31260 410 aaPredicted RBP8.02□□□□□ -1.13
CD46-203ENST00000354848 GMPRP36959 345 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 HPCAL1P37235 193 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 ETFBP38117 255 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 RARRES1P49788 294 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 PRKCQQ04759 706 aa8.02□□□□□ -1.13
CD46-203ENST00000354848 TRIM25Q14258 630 aaKnown RBP8.02□□□□□ -1.13
CD46-203ENST00000354848 RFTN1Q14699 578 aaPredicted RBP8.02□□□□□ -1.13
CD46-203ENST00000354848 SPDYE2Q495Y8 402 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms