RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 ALOX15P16050 662 aaPredicted RBP12.42□□□□□ -0.42
DDX4-201ENST00000353507 GMPRP36959 345 aa12.42□□□□□ -0.42
DDX4-201ENST00000353507 ADCYAP1R1P41586 468 aa12.42□□□□□ -0.42
DDX4-201ENST00000353507 HARS2P49590 506 aaKnown RBP12.42□□□□□ -0.42
DDX4-201ENST00000353507 PAPOLAP51003 745 aaKnown RBP12.42□□□□□ -0.42
DDX4-201ENST00000353507 NME3Q13232 169 aa12.42□□□□□ -0.42
DDX4-201ENST00000353507 ZBTB6Q15916 424 aa12.42□□□□□ -0.42
DDX4-201ENST00000353507 EP400NLQ6ZTU2 488 aa12.42□□□□□ -0.42
DDX4-201ENST00000353507 STRA8Q7Z7C7 330 aa12.42□□□□□ -0.42
DDX4-201ENST00000353507 ADGRG6Q86SQ4 1221 aa12.42□□□□□ -0.42
DDX4-201ENST00000353507 PIGZQ86VD9 579 aa12.42□□□□□ -0.42
DDX4-201ENST00000353507 DEFB107AQ8IZN7 70 aa12.42□□□□□ -0.42
DDX4-201ENST00000353507 DNAAF3Q8N9W5 541 aa12.42□□□□□ -0.42
DDX4-201ENST00000353507 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.42□□□□□ -0.42
DDX4-201ENST00000353507 APPL2Q8NEU8 664 aa12.42□□□□□ -0.42
DDX4-201ENST00000353507 PPP2R3CQ969Q6 453 aa12.42□□□□□ -0.42
DDX4-201ENST00000353507 RBBP8Q99708 897 aa12.42□□□□□ -0.42
DDX4-201ENST00000353507 NXF3Q9H4D5 531 aaKnown RBP12.42□□□□□ -0.42
DDX4-201ENST00000353507 IGSF9Q9P2J2 1179 aa12.42□□□□□ -0.42
DDX4-201ENST00000353507 LOC100653049A0A140TA62 436 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 EME2A4GXA9 379 aaPredicted RBP12.41□□□□□ -0.42
DDX4-201ENST00000353507 M0QYT0 321 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 KCNK1O00180 336 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 XPO1O14980 1071 aaKnown RBP12.41□□□□□ -0.42
DDX4-201ENST00000353507 KRT34O76011 436 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 CD4P01730 458 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 PRKCGP05129 697 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 AKAP5P24588 427 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 SERPINB6P35237 376 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 RPL34P49207 117 aaKnown RBP12.41□□□□□ -0.42
DDX4-201ENST00000353507 LRRC36Q1X8D7 754 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 TNS4Q8IZW8 715 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 HIPK4Q8NE63 616 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 OR6Y1Q8NGX8 325 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 ACTRT2Q8TDY3 377 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 IFT43Q96FT9 208 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 TNIP3Q96KP6 325 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 BFARQ9NZS9 450 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 PCDHB12Q9Y5F1 795 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 PDCD11Q14690 1871 aaKnown RBP12.41□□□□□ -0.42
DDX4-201ENST00000353507 DCXO43602 365 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 USP12O75317 370 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 HOXA11P31270 313 aaPredicted RBP12.41□□□□□ -0.42
DDX4-201ENST00000353507 ARRB2P32121 409 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 LIMK2P53671 638 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 PITX1P78337 314 aaPredicted RBP12.41□□□□□ -0.42
DDX4-201ENST00000353507 OLIG2Q13516 323 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 MOB2Q70IA6 237 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 PDZD4Q76G19 769 aaPredicted RBP12.41□□□□□ -0.42
DDX4-201ENST00000353507 FASTKD5Q7L8L6 764 aaKnown RBP12.41□□□□□ -0.42
DDX4-201ENST00000353507 SIX6OS1Q8N1H7 587 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 PHC3Q8NDX5 983 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 SH3GL3Q99963 347 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 DDX50Q9BQ39 737 aaKnown RBP12.41□□□□□ -0.42
DDX4-201ENST00000353507 PIDD1Q9HB75 910 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 LRRC4Q9HBW1 653 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 VANGL2Q9ULK5 521 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 E9PBE3 544 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 XPOTO43592 962 aaKnown RBP12.41□□□□□ -0.42
DDX4-201ENST00000353507 BUD23O43709 281 aaKnown RBP12.41□□□□□ -0.42
DDX4-201ENST00000353507 KLHL41O60662 606 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 TKTP29401 623 aaKnown RBP12.41□□□□□ -0.42
DDX4-201ENST00000353507 NOS2P35228 1153 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 TAF6P49848 677 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 GTF2A2P52657 109 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 TBL3Q12788 808 aaKnown RBP12.41□□□□□ -0.42
DDX4-201ENST00000353507 USP4Q13107 963 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 PPIL2Q13356 520 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 TCHHL1Q5QJ38 904 aaPredicted RBP12.41□□□□□ -0.42
DDX4-201ENST00000353507 MARCH8Q5T0T0 291 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 ZNF618Q5T7W0 954 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 ATG14Q6ZNE5 492 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 ZNF781Q8N8C0 355 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 FCRL3Q96P31 734 aaPredicted RBP12.41□□□□□ -0.42
DDX4-201ENST00000353507 PGLYRP2Q96PD5 576 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 OSMRQ99650 979 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 FAM192AQ9GZU8 254 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 CDH19Q9H159 772 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 ARHGAP26Q9UNA1 814 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 MAGED2Q9UNF1 606 aaPredicted RBP12.41□□□□□ -0.42
DDX4-201ENST00000353507 KCNH4Q9UQ05 1017 aa12.41□□□□□ -0.42
DDX4-201ENST00000353507 A0A096LPK6 155 aa12.4□□□□□ -0.42
DDX4-201ENST00000353507 HUS1O60921 280 aa12.4□□□□□ -0.42
DDX4-201ENST00000353507 ITGAXP20702 1163 aa12.4□□□□□ -0.42
DDX4-201ENST00000353507 PNPLA4P41247 253 aa12.4□□□□□ -0.42
DDX4-201ENST00000353507 PEX6Q13608 980 aa12.4□□□□□ -0.42
DDX4-201ENST00000353507 CCNIQ14094 377 aa12.4□□□□□ -0.42
DDX4-201ENST00000353507 PAFAH1B3Q15102 231 aaKnown RBP12.4□□□□□ -0.42
DDX4-201ENST00000353507 FRMD7Q6ZUT3 714 aa12.4□□□□□ -0.42
DDX4-201ENST00000353507 PLD6Q8N2A8 252 aaKnown RBP12.4□□□□□ -0.42
DDX4-201ENST00000353507 SHCBP1Q8NEM2 672 aa12.4□□□□□ -0.42
DDX4-201ENST00000353507 AGR3Q8TD06 166 aa12.4□□□□□ -0.42
DDX4-201ENST00000353507 EBF3Q9H4W6 596 aa12.4□□□□□ -0.42
DDX4-201ENST00000353507 COG4Q9H9E3 785 aa12.4□□□□□ -0.42
DDX4-201ENST00000353507 KLK14Q9P0G3 267 aa12.4□□□□□ -0.42
DDX4-201ENST00000353507 SHROOM3Q8TF72 1996 aa12.4□□□□□ -0.42
DDX4-201ENST00000353507 ZNF195O14628 629 aa12.4□□□□□ -0.43
DDX4-201ENST00000353507 SPTLC1O15269 473 aa12.4□□□□□ -0.43
DDX4-201ENST00000353507 ADCY6O43306 1168 aa12.4□□□□□ -0.43
DDX4-201ENST00000353507 ZNF189O75820 626 aaPredicted RBP12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms