RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 TNIP3Q96KP6 325 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 ADPGKQ9BRR6 497 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 SLC4A5Q9BY07 1137 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 TMEM117Q9H0C3 514 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 PLEKHA5Q9HAU0 1116 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 RIC8BQ9NVN3 520 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 GLS2Q9UI32 602 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 EIF3DO15371 548 aaKnown RBP eCLIP5.13□□□□□ -1.59
SKP1-202ENST00000353411 NCAM2O15394 837 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 DNAJB5O75953 348 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 GH1P01241 217 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 GNA15P30679 374 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 HOXC9P31274 260 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 RCVRNP35243 200 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 SURF1Q15526 300 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 PGS1Q32NB8 556 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 CIAPIN1Q6FI81 312 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 ALYREFQ86V81 257 aaKnown RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 CHSY1Q86X52 802 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 ZFP28Q8NHY6 868 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 SPATA18Q8TC71 538 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 VPS35Q96QK1 796 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 STRBPQ96SI9 672 aaKnown RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 POLR3BQ9NW08 1133 aaPredicted RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 ZNF222Q9UK12 451 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 NCAPD2Q15021 1401 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 ZW10O43264 779 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 DYRK3O43781 588 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 CCNT2O60583 730 aaKnown RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 HUS1O60921 280 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 SPTBP11277 2137 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 IFI30P13284 250 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 ERP29P30040 261 aaKnown RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 RFC4P35249 363 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 STAT5AP42229 794 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 STAT5BP51692 787 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 PGDP52209 483 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 ARPP19P56211 112 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 GNA12Q03113 381 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 MZT2AQ6P582 158 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 DCDC5Q6ZRR9 648 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 FKBP9P1Q75LS8 142 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 ZNF410Q86VK4 478 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 SLC22A16Q86VW1 577 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 CPXCR1Q8N123 301 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 ZNF486Q96H40 463 aaPredicted RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 GTPBP2Q9BX10 602 aaKnown RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 TMEM168Q9H0V1 697 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 NOL11Q9H8H0 719 aaKnown RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 FAM49BQ9NUQ9 324 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 SMPD3Q9NY59 655 aaPredicted RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 TMEM5Q9Y2B1 443 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 CLTCQ00610 1675 aaKnown RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 DHRS12A0PJE2 317 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 PLK4O00444 970 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 SLC22A2O15244 555 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 BMP6P22004 513 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 GCLMP48507 274 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 P2RY8Q86VZ1 359 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 THNSL1Q8IYQ7 743 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 SLC7A5P1Q8MH63 180 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 SPATA20Q8TB22 786 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 SDR42E1Q8WUS8 393 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 JPH3Q8WXH2 748 aaPredicted RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 OTUB1Q96FW1 271 aaPredicted RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 IL1RL2Q9HB29 575 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 OSGEPQ9NPF4 335 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 SNTG2Q9NY99 539 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 RGS17Q9UGC6 210 aaPredicted RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 SPHKAPQ2M3C7 1700 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 TFECO14948 347 aaPredicted RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 MPOP05164 745 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 GUCY1A2P33402 732 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 BNIP3Q12983 259 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 SLC39A6Q13433 755 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 SNRNP48Q6IEG0 339 aaKnown RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 POLNQ7Z5Q5 900 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 SH3RF1Q7Z6J0 888 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 ACTRT2Q8TDY3 377 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 KLHL8Q9P2G9 620 aaPredicted RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 DGKBQ9Y6T7 804 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 MYH4Q9Y623 1939 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 PRR5-ARHGAP8B1AHC4 643 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 H0YJX3 145 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 MEIS1O00470 390 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 ORC5O43913 435 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 PRKCIP41743 596 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 ARHGAP8P85298 464 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 NSUN2Q08J23 767 aaKnown RBP eCLIP5.13□□□□□ -1.59
SKP1-202ENST00000353411 MKRN4PQ13434 485 aaPredicted RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 TFDP1Q14186 410 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 FASTKQ14296 549 aaKnown RBP5.13□□□□□ -1.59
SKP1-202ENST00000353411 WDR72Q3MJ13 1102 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 NT5DC4Q86YG4 428 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 TBC1D21Q8IYX1 336 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 TAGAPQ8N103 731 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 MTRRQ9UBK8 725 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 POMPQ9Y244 141 aa5.13□□□□□ -1.59
SKP1-202ENST00000353411 ATP8B3O60423 1300 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms