RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 SLC28A2O43868 658 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 GAS8O95995 478 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 KRT1P04264 644 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 KRT7P08729 469 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 NUDT17P0C025 328 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 RALAP11233 206 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 KRT3P12035 628 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 GP1BBP13224 206 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 GJA1P17302 382 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 IGFBP6P24592 240 aaPredicted RBP8.53□□□□□ -1.04
CD44-205ENST00000352818 LRPAP1P30533 357 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 PCK1P35558 622 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 RPL21P46778 160 aaKnown RBP8.53□□□□□ -1.04
CD44-205ENST00000352818 RAB27AP51159 221 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 SCNN1GP51170 649 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 EIF3BP55884 814 aaKnown RBP8.53□□□□□ -1.04
CD44-205ENST00000352818 SNX16P57768 344 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 PSMC1P62191 440 aaKnown RBP8.53□□□□□ -1.04
CD44-205ENST00000352818 CREMQ03060 361 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 TNK2Q07912 1038 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 RAB33AQ14088 237 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 TAZQ16635 292 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 HADHQ16836 314 aaKnown RBP8.53□□□□□ -1.04
CD44-205ENST00000352818 TUBB8Q3ZCM7 444 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 TMEM196Q5HYL7 178 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 CYP4A22Q5TCH4 519 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 NAIF1Q69YI7 327 aaPredicted RBP8.53□□□□□ -1.04
CD44-205ENST00000352818 GPR155Q7Z3F1 870 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 ADAT2Q7Z6V5 191 aaKnown RBP8.53□□□□□ -1.04
CD44-205ENST00000352818 VSIG1Q86XK7 387 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 DDX42Q86XP3 938 aaKnown RBP eCLIP8.53□□□□□ -1.04
CD44-205ENST00000352818 GSTCDQ8NEC7 633 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 ATL2Q8NHH9 583 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 FAM76AQ8TAV0 307 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 CCHCR1Q8TD31 782 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 CSGALNACT1Q8TDX6 532 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 EZH1Q92800 747 aaPredicted RBP8.53□□□□□ -1.04
CD44-205ENST00000352818 ART4Q93070 314 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 SLITRK1Q96PX8 696 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 GAD1Q99259 594 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 NCAPGQ9BPX3 1015 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 TRIM4Q9C037 500 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 TSPYL1Q9H0U9 437 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 DPH5Q9H2P9 285 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 FAM204AQ9H8W3 233 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.53□□□□□ -1.04
CD44-205ENST00000352818 MTRF1LQ9UGC7 380 aaKnown RBP8.53□□□□□ -1.04
CD44-205ENST00000352818 TUBGCP4Q9UGJ1 667 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 IL17BQ9UHF5 180 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 ADAM28Q9UKQ2 775 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 PLAAQ9Y263 795 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 NFS1Q9Y697 457 aa8.53□□□□□ -1.04
CD44-205ENST00000352818 ATXN2Q99700 1313 aaKnown RBP8.53□□□□□ -1.04
CD44-205ENST00000352818 POLQO75417 2590 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 hCG_1818297A0A087WSY0 165 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 SMIM28A0A1B0GU29 152 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 FAM149AA5PLN7 773 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 GOLGA6CA6NDK9 693 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 C3orf70A6NLC5 250 aaPredicted RBP8.52□□□□□ -1.05
CD44-205ENST00000352818 HMGB1P1B2RPK0 211 aaPredicted RBP8.52□□□□□ -1.05
CD44-205ENST00000352818 F8VP50 259 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 TJP3O95049 919 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 GJB6O95452 261 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 EGFP01133 1207 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 ERBB2P04626 1255 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 GOLGA6DP0CG33 693 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 ITIH2P19823 946 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 POU3F2P20265 443 aaPredicted RBP8.52□□□□□ -1.05
CD44-205ENST00000352818 PSMA2P25787 234 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 MLH1P40692 756 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 CDKN2BP42772 138 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 RPL34P49207 117 aaKnown RBP8.52□□□□□ -1.05
CD44-205ENST00000352818 DHPSP49366 369 aaPredicted RBP8.52□□□□□ -1.05
CD44-205ENST00000352818 TAF6P49848 677 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 SKOR1P84550 965 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 DHX9Q08211 1270 aaKnown RBP8.52□□□□□ -1.05
CD44-205ENST00000352818 HNRNPDQ14103 355 aaKnown RBP8.52□□□□□ -1.05
CD44-205ENST00000352818 LY6DQ14210 128 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 SLMAPQ14BN4 828 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 PSMD5Q16401 504 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 SV2CQ496J9 727 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 TTMPQ5BVD1 217 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 TFDP3Q5H9I0 405 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 AGBL2Q5U5Z8 902 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 PEAR1Q5VY43 1037 aaPredicted RBP8.52□□□□□ -1.05
CD44-205ENST00000352818 RHBDF2Q6PJF5 856 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 SPOCD1Q6ZMY3 1216 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 DPH6Q7L8W6 267 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 ARCQ7LC44 396 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 PHLDB2Q86SQ0 1253 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 CROCCP2Q86T23 111 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 ZDHHC17Q8IUH5 632 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 CCDC50Q8IVM0 306 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 HS6ST3Q8IZP7 471 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 CRYBG2Q8N1P7 616 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 MINDY1Q8N5J2 469 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 FRMD1Q8N878 549 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 BBOF1Q8ND07 529 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 ZSCAN18Q8TBC5 510 aaPredicted RBP8.52□□□□□ -1.05
CD44-205ENST00000352818 FBXO25Q8TCJ0 367 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms