RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 PLD6Q8N2A8 252 aaKnown RBP25.12■■□□□ 1.61
CPNE1-202ENST00000352393 HSFY1Q96LI6 401 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 FERMT1Q9BQL6 677 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 SEPT10Q9P0V9 454 aa25.12■■□□□ 1.61
CPNE1-202ENST00000352393 E2F8A0AVK6 867 aa25.11■■□□□ 1.61
CPNE1-202ENST00000352393 COX4I1P13073 169 aa25.11■■□□□ 1.61
CPNE1-202ENST00000352393 PEX2P28328 305 aa25.11■■□□□ 1.61
CPNE1-202ENST00000352393 POLE2P56282 527 aa25.11■■□□□ 1.61
CPNE1-202ENST00000352393 TBL3Q12788 808 aaKnown RBP25.11■■□□□ 1.61
CPNE1-202ENST00000352393 PEX6Q13608 980 aa25.11■■□□□ 1.61
CPNE1-202ENST00000352393 FSCBQ5H9T9 825 aa25.11■■□□□ 1.61
CPNE1-202ENST00000352393 HPS6Q86YV9 775 aa25.11■■□□□ 1.61
CPNE1-202ENST00000352393 DEFB106AQ8N104 65 aa25.11■■□□□ 1.61
CPNE1-202ENST00000352393 FBXW8Q8N3Y1 598 aa25.11■■□□□ 1.61
CPNE1-202ENST00000352393 ZNF781Q8N8C0 355 aa25.11■■□□□ 1.61
CPNE1-202ENST00000352393 BEST2Q8NFU1 509 aa25.11■■□□□ 1.61
CPNE1-202ENST00000352393 GDPD5Q8WTR4 605 aa25.11■■□□□ 1.61
CPNE1-202ENST00000352393 PRDM12Q9H4Q4 367 aa25.11■■□□□ 1.61
CPNE1-202ENST00000352393 COG4Q9H9E3 785 aa25.11■■□□□ 1.61
CPNE1-202ENST00000352393 TSC2P49815 1807 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 CASQ2O14958 399 aaPredicted RBP25.1■■□□□ 1.61
CPNE1-202ENST00000352393 DCXO43602 365 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 DAB1O75553 588 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 UQCRBP14927 111 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 NUMBP49757 651 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 RAB27AP51159 221 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 MTTPP55157 894 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 PAFAH1B3Q15102 231 aaKnown RBP25.1■■□□□ 1.61
CPNE1-202ENST00000352393 C9orf57Q5W0N0 161 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 AP1ARQ63HQ0 302 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 CLEC14AQ86T13 490 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 ARHGAP18Q8N392 663 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 OTUD5Q96G74 571 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 GORASP1Q9BQQ3 440 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 TMPRSS4Q9NRS4 437 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 GJD2Q9UKL4 321 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 SBF1O95248 1867 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 TMEM114B3SHH9 223 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 G3V2L1 256 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 MYCNP04198 464 aaPredicted RBP25.1■■□□□ 1.61
CPNE1-202ENST00000352393 AQP4P55087 323 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 INHBEP58166 350 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 IFRD2Q12894 506 aaPredicted RBP25.1■■□□□ 1.61
CPNE1-202ENST00000352393 USP4Q13107 963 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 KLF10Q13118 480 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 NAPRTQ6XQN6 538 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 BNIPLQ7Z465 357 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 TNS4Q8IZW8 715 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 PGLYRP2Q96PD5 576 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 ARHGAP26Q9UNA1 814 aa25.1■■□□□ 1.61
CPNE1-202ENST00000352393 H3BNX3 289 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 PDGFRBP09619 1106 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 SPRP35270 261 aaPredicted RBP25.09■■□□□ 1.61
CPNE1-202ENST00000352393 PITX1P78337 314 aaPredicted RBP25.09■■□□□ 1.61
CPNE1-202ENST00000352393 FRG1Q14331 258 aaKnown RBP25.09■■□□□ 1.61
CPNE1-202ENST00000352393 LRRC36Q1X8D7 754 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 SLC9B1Q4ZJI4 515 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 ARMCX2Q7L311 632 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 ZNF410Q86VK4 478 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 RTKNQ9BST9 563 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 LRRC40Q9H9A6 602 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 ELP3Q9H9T3 547 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 LOC100653049A0A140TA62 436 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 ASB14A6NK59 587 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 KRT34O76011 436 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 HSPA4LO95757 839 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 RAG1P15918 1043 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 LMO2P25791 158 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 RPL26P61254 145 aaKnown RBP25.09■■□□□ 1.61
CPNE1-202ENST00000352393 OLIG2Q13516 323 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 DPYSQ14117 519 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 GRM2Q14416 872 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 LIN52Q52LA3 116 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 GLRA4Q5JXX5 417 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 TCHHL1Q5QJ38 904 aaPredicted RBP25.09■■□□□ 1.61
CPNE1-202ENST00000352393 KBTBD6Q86V97 674 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 ST13P4Q8IZP2 240 aaPredicted RBP25.09■■□□□ 1.61
CPNE1-202ENST00000352393 CCNYQ8ND76 341 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 OR52K1Q8NGK4 314 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 PPTC7Q8NI37 304 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 SLC2A14Q8TDB8 520 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 ZNF669Q96BR6 464 aaPredicted RBP25.09■■□□□ 1.61
CPNE1-202ENST00000352393 C16orf70Q9BSU1 422 aa25.09■■□□□ 1.61
CPNE1-202ENST00000352393 PPP1R1BQ9UD71 204 aaPredicted RBP25.09■■□□□ 1.61
CPNE1-202ENST00000352393 ZMPSTE24O75844 475 aa25.08■■□□□ 1.61
CPNE1-202ENST00000352393 ACAT1P24752 427 aaKnown RBP25.08■■□□□ 1.61
CPNE1-202ENST00000352393 HOXA11P31270 313 aaPredicted RBP25.08■■□□□ 1.61
CPNE1-202ENST00000352393 MED21Q13503 144 aa25.08■■□□□ 1.61
CPNE1-202ENST00000352393 METTL21CQ5VZV1 264 aa25.08■■□□□ 1.61
CPNE1-202ENST00000352393 MAMDC4Q6UXC1 1216 aa25.08■■□□□ 1.61
CPNE1-202ENST00000352393 STRA8Q7Z7C7 330 aa25.08■■□□□ 1.61
CPNE1-202ENST00000352393 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.08■■□□□ 1.61
CPNE1-202ENST00000352393 MAPK15Q8TD08 544 aa25.08■■□□□ 1.61
CPNE1-202ENST00000352393 NCSTNQ92542 709 aa25.08■■□□□ 1.61
CPNE1-202ENST00000352393 SPATA16Q9BXB7 569 aa25.08■■□□□ 1.61
CPNE1-202ENST00000352393 E9PBE3 544 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 KLHL41O60662 606 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 GLDCP23378 1020 aa25.07■■□□□ 1.6
CPNE1-202ENST00000352393 TKTP29401 623 aaKnown RBP25.07■■□□□ 1.6
CPNE1-202ENST00000352393 CNPY1Q3B7I2 92 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms