RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 CHST9Q7L1S5 443 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 LRRN4CLQ8ND94 238 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 SLC35B2Q8TB61 432 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 OSCP1Q8WVF1 389 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 TMA16Q96EY4 203 aaKnown RBP27.84■■■□□ 2.05
SSBP4-202ENST00000348495 OLFM3Q96PB7 478 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 FAM118BQ9BPY3 351 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 FRMD8P1Q9BZ68 369 aaPredicted RBP27.84■■■□□ 2.05
SSBP4-202ENST00000348495 HOMER3Q9NSC5 361 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 HEY1Q9Y5J3 304 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 WNT6Q9Y6F9 365 aa27.84■■■□□ 2.05
SSBP4-202ENST00000348495 RIOK3O14730 519 aaKnown RBP27.83■■■□□ 2.05
SSBP4-202ENST00000348495 C2orf54Q08AI8 447 aa27.83■■■□□ 2.05
SSBP4-202ENST00000348495 MPP7Q5T2T1 576 aa27.83■■■□□ 2.05
SSBP4-202ENST00000348495 AFMIDQ63HM1 303 aa27.83■■■□□ 2.05
SSBP4-202ENST00000348495 RNF43Q68DV7 783 aa27.83■■■□□ 2.05
SSBP4-202ENST00000348495 TFAP2DQ7Z6R9 452 aa27.83■■■□□ 2.05
SSBP4-202ENST00000348495 UMODL1-AS1Q8N2C9 162 aa27.83■■■□□ 2.05
SSBP4-202ENST00000348495 LZTR1Q8N653 840 aa27.83■■■□□ 2.05
SSBP4-202ENST00000348495 DONSONQ9NYP3 566 aa27.83■■■□□ 2.05
SSBP4-202ENST00000348495 A0A1B0GVM2 712 aa27.82■■■□□ 2.04
SSBP4-202ENST00000348495 TCAF2A6NFQ2 919 aa27.82■■■□□ 2.04
SSBP4-202ENST00000348495 PHF2O75151 1096 aa27.82■■■□□ 2.04
SSBP4-202ENST00000348495 CLDN11O75508 207 aa27.82■■■□□ 2.04
SSBP4-202ENST00000348495 SERPINB6P35237 376 aa27.82■■■□□ 2.04
SSBP4-202ENST00000348495 DRICH1Q6PGQ1 229 aaPredicted RBP27.82■■■□□ 2.04
SSBP4-202ENST00000348495 VITQ6UXI7 678 aa27.82■■■□□ 2.04
SSBP4-202ENST00000348495 ADGRG2Q8IZP9 1017 aa27.82■■■□□ 2.04
SSBP4-202ENST00000348495 NKD2Q969F2 451 aaPredicted RBP27.82■■■□□ 2.04
SSBP4-202ENST00000348495 ELSPBP1Q96BH3 223 aa27.82■■■□□ 2.04
SSBP4-202ENST00000348495 NOL6Q9H6R4 1146 aaKnown RBP27.82■■■□□ 2.04
SSBP4-202ENST00000348495 LIASO43766 372 aa27.81■■■□□ 2.04
SSBP4-202ENST00000348495 MAPKAPK2P49137 400 aa27.81■■■□□ 2.04
SSBP4-202ENST00000348495 FCHO2Q0JRZ9 810 aa27.81■■■□□ 2.04
SSBP4-202ENST00000348495 LEXMQ3ZCV2 418 aa27.81■■■□□ 2.04
SSBP4-202ENST00000348495 MPPE1Q53F39 396 aa27.81■■■□□ 2.04
SSBP4-202ENST00000348495 PARM1Q6UWI2 310 aa27.81■■■□□ 2.04
SSBP4-202ENST00000348495 ARHGAP12Q8IWW6 846 aa27.81■■■□□ 2.04
SSBP4-202ENST00000348495 TP53INP2Q8IXH6 220 aa27.81■■■□□ 2.04
SSBP4-202ENST00000348495 ST13P5Q8NFI4 369 aaPredicted RBP27.81■■■□□ 2.04
SSBP4-202ENST00000348495 FGF14Q92915 247 aa27.81■■■□□ 2.04
SSBP4-202ENST00000348495 RAD54BQ9Y620 910 aa27.81■■■□□ 2.04
SSBP4-202ENST00000348495 TBL1XO60907 577 aa27.81■■■□□ 2.04
SSBP4-202ENST00000348495 FYB2Q5VWT5 728 aa27.81■■■□□ 2.04
SSBP4-202ENST00000348495 TTC27Q6P3X3 843 aa27.81■■■□□ 2.04
SSBP4-202ENST00000348495 MFSD6LQ8IWD5 586 aa27.81■■■□□ 2.04
SSBP4-202ENST00000348495 IRF7Q92985 503 aa27.81■■■□□ 2.04
SSBP4-202ENST00000348495 MAGOHBQ96A72 148 aaKnown RBP27.81■■■□□ 2.04
SSBP4-202ENST00000348495 ASIC4Q96FT7 647 aa27.81■■■□□ 2.04
SSBP4-202ENST00000348495 PLA2G2FQ9BZM2 168 aa27.81■■■□□ 2.04
SSBP4-202ENST00000348495 DDX47Q9H0S4 455 aaKnown RBP27.81■■■□□ 2.04
SSBP4-202ENST00000348495 DUS2Q9NX74 493 aaKnown RBP27.81■■■□□ 2.04
SSBP4-202ENST00000348495 DNPEPQ9ULA0 475 aa27.81■■■□□ 2.04
SSBP4-202ENST00000348495 MAP3K6O95382 1288 aa27.8■■■□□ 2.04
SSBP4-202ENST00000348495 SLU7O95391 586 aaKnown RBP27.8■■■□□ 2.04
SSBP4-202ENST00000348495 OASLQ15646 514 aaKnown RBP27.8■■■□□ 2.04
SSBP4-202ENST00000348495 EML3Q32P44 896 aa27.8■■■□□ 2.04
SSBP4-202ENST00000348495 TPGS1Q6ZTW0 290 aa27.8■■■□□ 2.04
SSBP4-202ENST00000348495 TMEM25Q86YD3 366 aa27.8■■■□□ 2.04
SSBP4-202ENST00000348495 NETO2Q8NC67 525 aa27.8■■■□□ 2.04
SSBP4-202ENST00000348495 FAM83CQ9BQN1 747 aa27.8■■■□□ 2.04
SSBP4-202ENST00000348495 SPHK2Q9NRA0 654 aa27.8■■■□□ 2.04
SSBP4-202ENST00000348495 TBC1D30Q9Y2I9 924 aa27.8■■■□□ 2.04
SSBP4-202ENST00000348495 ANHXE9PGG2 379 aa27.79■■■□□ 2.04
SSBP4-202ENST00000348495 ECI2O75521 394 aa27.79■■■□□ 2.04
SSBP4-202ENST00000348495 PENKP01210 267 aaPredicted RBP27.79■■■□□ 2.04
SSBP4-202ENST00000348495 HOXD9P28356 352 aaPredicted RBP27.79■■■□□ 2.04
SSBP4-202ENST00000348495 CHRNA3P32297 505 aa27.79■■■□□ 2.04
SSBP4-202ENST00000348495 NDST2P52849 883 aa27.79■■■□□ 2.04
SSBP4-202ENST00000348495 GALNT2Q10471 571 aa27.79■■■□□ 2.04
SSBP4-202ENST00000348495 XRCC4Q13426 336 aa27.79■■■□□ 2.04
SSBP4-202ENST00000348495 BZW1Q7L1Q6 419 aaKnown RBP27.79■■■□□ 2.04
SSBP4-202ENST00000348495 NOA1Q8NC60 698 aaKnown RBP27.79■■■□□ 2.04
SSBP4-202ENST00000348495 DDI1Q8WTU0 396 aa27.79■■■□□ 2.04
SSBP4-202ENST00000348495 CELF6Q96J87 481 aaKnown RBP27.79■■■□□ 2.04
SSBP4-202ENST00000348495 MARK1Q9P0L2 795 aa27.79■■■□□ 2.04
SSBP4-202ENST00000348495 TYW5A2RUC4 315 aaKnown RBP27.78■■■□□ 2.04
SSBP4-202ENST00000348495 OR1E1P30953 314 aa27.78■■■□□ 2.04
SSBP4-202ENST00000348495 COILP38432 576 aaPredicted RBP27.78■■■□□ 2.04
SSBP4-202ENST00000348495 FNTAP49354 379 aa27.78■■■□□ 2.04
SSBP4-202ENST00000348495 EIF3EP60228 445 aaKnown RBP27.78■■■□□ 2.04
SSBP4-202ENST00000348495 SNX1Q13596 522 aa27.78■■■□□ 2.04
SSBP4-202ENST00000348495 HTR4Q13639 388 aa27.78■■■□□ 2.04
SSBP4-202ENST00000348495 BYSLQ13895 437 aaKnown RBP27.78■■■□□ 2.04
SSBP4-202ENST00000348495 SMAD2Q15796 467 aaKnown RBP27.78■■■□□ 2.04
SSBP4-202ENST00000348495 RHBDF2Q6PJF5 856 aa27.78■■■□□ 2.04
SSBP4-202ENST00000348495 MTSS1LQ765P7 747 aa27.78■■■□□ 2.04
SSBP4-202ENST00000348495 MMGT1Q8N4V1 131 aa27.78■■■□□ 2.04
SSBP4-202ENST00000348495 KXD1Q9BQD3 176 aa27.78■■■□□ 2.04
SSBP4-202ENST00000348495 THG1LQ9NWX6 298 aaKnown RBP27.78■■■□□ 2.04
SSBP4-202ENST00000348495 SPTBN5Q9NRC6 3674 aaKnown RBP27.78■■■□□ 2.04
SSBP4-202ENST00000348495 MCF2LO15068 1137 aa27.78■■■□□ 2.04
SSBP4-202ENST00000348495 LUC7L3O95232 432 aaKnown RBP27.78■■■□□ 2.04
SSBP4-202ENST00000348495 CYBBP04839 570 aa27.78■■■□□ 2.04
SSBP4-202ENST00000348495 LY6G5CQ5SRR4 150 aa27.78■■■□□ 2.04
SSBP4-202ENST00000348495 CXorf57Q6NSI4 855 aaKnown RBP27.78■■■□□ 2.04
SSBP4-202ENST00000348495 SETD3Q86TU7 594 aaPredicted RBP27.78■■■□□ 2.04
SSBP4-202ENST00000348495 KLHL7Q8IXQ5 586 aa27.78■■■□□ 2.04
SSBP4-202ENST00000348495 KRT12Q99456 494 aa27.78■■■□□ 2.04
SSBP4-202ENST00000348495 SLC39A8Q9C0K1 460 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms