RNA–Protein interactions for RNA: ENST00000348069.6

NLRP3-202, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-202ENST00000348069 RNF208Q9H0X6 261 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 UPF3AQ9H1J1 476 aaKnown RBP8.28□□□□□ -1.08
NLRP3-202ENST00000348069 TLE6Q9H808 572 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 TRMT13Q9NUP7 481 aaKnown RBP8.28□□□□□ -1.08
NLRP3-202ENST00000348069 USP18Q9UMW8 372 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 SSC5DA1L4H1 1573 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 LAMA2P24043 3122 aaKnown RBP8.28□□□□□ -1.08
NLRP3-202ENST00000348069 ADCY6O43306 1168 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 HCRTO43612 131 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 HUS1O60921 280 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 GLRA3O75311 464 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 APOEP02649 317 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 ASGR1P07306 291 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 SDC4P31431 198 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 ARL2P36404 184 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 ARL1P40616 181 aaPredicted RBP8.28□□□□□ -1.08
NLRP3-202ENST00000348069 CDKN2BP42772 138 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 CCL23P55773 120 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 TCEAL1Q15170 157 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 ZNF792Q3KQV3 632 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 LRRC38Q5VT99 294 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 B3GNT9Q6UX72 402 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 PHF13Q86YI8 300 aaPredicted RBP8.28□□□□□ -1.08
NLRP3-202ENST00000348069 RELL1Q8IUW5 271 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 NETO2Q8NC67 525 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 GTF3C2Q8WUA4 911 aaPredicted RBP8.28□□□□□ -1.08
NLRP3-202ENST00000348069 NIF3L1Q9GZT8 377 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 PLA2G4CQ9UP65 541 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 SNX13Q9Y5W8 968 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 AK5Q9Y6K8 562 aa8.28□□□□□ -1.08
NLRP3-202ENST00000348069 CCDC78A2IDD5 438 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 TMEM221A6NGB7 291 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 APOC4-APOC2K7ER74 178 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 SOCS7O14512 581 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 ITGBL1O95965 494 aaPredicted RBP8.27□□□□□ -1.09
NLRP3-202ENST00000348069 APOC2P02655 101 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 THRAP10827 490 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 FGFR1P11362 822 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 CCND3P30281 292 aaPredicted RBP8.27□□□□□ -1.09
NLRP3-202ENST00000348069 CD52P31358 61 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 NOGQ13253 232 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 RPS6KA2Q15349 733 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 NOTUMQ6P988 496 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 BBS12Q6ZW61 710 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 SNX32Q86XE0 403 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 BEST2Q8NFU1 509 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 ZSCAN18Q8TBC5 510 aaPredicted RBP8.27□□□□□ -1.09
NLRP3-202ENST00000348069 DCAKDQ8WVC6 231 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 C7orf26Q96N11 449 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 NACA2Q9H009 215 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 UTP6Q9NYH9 597 aaKnown RBP8.27□□□□□ -1.09
NLRP3-202ENST00000348069 GTSE1Q9NYZ3 720 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 CDH22Q9UJ99 828 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 AURKCQ9UQB9 309 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 SSX2IPQ9Y2D8 614 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 SERPINE1P05121 402 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 MMP8P22894 467 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 MIPP30301 263 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 ARL4AP40617 200 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 MLH1P40692 756 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 WASHC5Q12768 1159 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 MMRN1Q13201 1228 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 KCNA10Q16322 511 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 ZACNQ401N2 412 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 VWA5B1Q5TIE3 1220 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 LRRC8EQ6NSJ5 796 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 LAYNQ6UX15 382 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 PLPPR4Q7Z2D5 763 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 CDKL3Q8IVW4 592 aaPredicted RBP8.27□□□□□ -1.09
NLRP3-202ENST00000348069 PQLC1Q8N2U9 271 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 KYQ8NBH2 561 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 DDX1Q92499 740 aaKnown RBP8.27□□□□□ -1.09
NLRP3-202ENST00000348069 DCUN1D1Q96GG9 259 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 CGRRF1Q99675 332 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 HAPLN2Q9GZV7 340 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 PAIP1Q9H074 479 aaKnown RBP8.27□□□□□ -1.09
NLRP3-202ENST00000348069 SEMA6AQ9H2E6 1030 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 APOBEC3GQ9HC16 384 aaKnown RBP8.27□□□□□ -1.09
NLRP3-202ENST00000348069 PNPOQ9NVS9 261 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 SORCS3Q9UPU3 1222 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 AKAP10O43572 662 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 TPST1O60507 370 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 C22orf31O95567 290 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 BPGMP07738 259 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 CPA3P15088 417 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 GRK2P25098 689 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 RBL1P28749 1068 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 SLC26A2P50443 739 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 NME3Q13232 169 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 TAF12Q16514 161 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 C1orf220Q5T0J3 134 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 ZNF786Q8N393 782 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 FRMD8Q9BZ67 464 aaPredicted RBP8.27□□□□□ -1.09
NLRP3-202ENST00000348069 FRMD8P1Q9BZ68 369 aaPredicted RBP8.27□□□□□ -1.09
NLRP3-202ENST00000348069 TCF7L2Q9NQB0 619 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 RNF186Q9NXI6 227 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 PTTG2Q9NZH5 202 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 TUBGCP4Q9UGJ1 667 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 POMPQ9Y244 141 aa8.27□□□□□ -1.09
NLRP3-202ENST00000348069 MSCO60682 206 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms