RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 NSMCE4AQ9NXX6 385 aa10.36□□□□□ -0.75
TRAPPC6B-202ENST00000347691 RGS17Q9UGC6 210 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC6B-202ENST00000347691 ANKRD6Q9Y2G4 727 aa10.36□□□□□ -0.75
TRAPPC6B-202ENST00000347691 RAP2CQ9Y3L5 183 aa10.36□□□□□ -0.75
TRAPPC6B-202ENST00000347691 AP4B1Q9Y6B7 739 aa10.36□□□□□ -0.75
TRAPPC6B-202ENST00000347691 BRWD3Q6RI45 1802 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 E9PBE3 544 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 HDAC3O15379 428 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 KLHL41O60662 606 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 FBXO21O94952 628 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 CCDC166P0CW27 439 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 SRGAP2BP0DMP2 458 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 PTPRAP18433 802 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 DNAJB1P25685 340 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 GLUD2P49448 558 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 LIMK2P53671 638 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 CSE1LP55060 971 aaKnown RBP10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 SESN2P58004 480 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 CREB5Q02930 508 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 MBTD1Q05BQ5 628 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 TRIM50Q86XT4 487 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 TRPC4APQ8TEL6 797 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 SHCBP1LQ9BZQ2 653 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 GGA3Q9NZ52 723 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 DTLQ9NZJ0 730 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 ZNF112Q9UJU3 913 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 NOP56O00567 594 aaKnown RBP10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 MGAMO43451 1857 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 MAP3K6O95382 1288 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 PGM3O95394 542 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 CRTAMO95727 393 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 PFKMP08237 780 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 ME2P23368 584 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 EDNRBP24530 442 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 PPARGP37231 505 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 RGS7P49802 495 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 IFRD2Q12894 506 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 RAB6CQ53S08 254 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 SEL1L3Q68CR1 1132 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 SLC26A9Q7LBE3 791 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 LRRC71Q8N4P6 559 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 CXorf38Q8TB03 319 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 LENG8Q96PV6 779 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 RAB6CQ9H0N0 254 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 IGSF9Q9P2J2 1179 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 ZBTB14O43829 449 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 TADA2AO75478 443 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 PRKCGP05129 697 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 TFAP2AP05549 437 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 CYP3A5P20815 502 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 ADORA2AP29274 412 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 GRIA1P42261 906 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 ACADSBP45954 432 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 SLC10A2Q12908 348 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 PRKAA1Q13131 559 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 DPYSQ14117 519 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 TBC1D25Q3MII6 688 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 PKDCCQ504Y2 493 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 VWA5B1Q5TIE3 1220 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 MAP1SQ66K74 1059 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 NCBP2-AS2Q69YL0 99 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 KLHDC10Q6PID8 442 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 STRADAQ7RTN6 431 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 DSELQ8IZU8 1212 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 DCLK2Q8N568 766 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 ZNF781Q8N8C0 355 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 ARNTL2Q8WYA1 636 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 PIWIL1Q96J94 861 aaKnown RBP10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 ZCWPW1Q9H0M4 648 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 EFCAB1Q9HAE3 211 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 CHCHD3Q9NX63 227 aaKnown RBP10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 RPS6KL1Q9Y6S9 549 aa10.35□□□□□ -0.75
TRAPPC6B-202ENST00000347691 MAGEB16A2A368 324 aa10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 AP3B1O00203 1094 aa10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 PIK3R2O00459 728 aa10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 AIM2O14862 343 aa10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 VILLO15195 856 aa10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 RPS12P25398 132 aaKnown RBP10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 RPL14P50914 215 aaKnown RBP10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 ZNF280AP59817 542 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 CXCL9Q07325 125 aa10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 ART3Q13508 389 aa10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 SLC9B1Q4ZJI4 515 aa10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 PIGGQ5H8A4 983 aa10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 PDZD4Q76G19 769 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 SNX32Q86XE0 403 aa10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 TICAM1Q8IUC6 712 aa10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 CNTD1Q8N815 330 aa10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 PGBD4Q96DM1 585 aa10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 KCTD15Q96SI1 283 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 RNPEPQ9H4A4 650 aa10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 QTRT2Q9H974 415 aaKnown RBP10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 DPP3Q9NY33 737 aa10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 BFARQ9NZS9 450 aa10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 RIMS3Q9UJD0 308 aa10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 SPDYE16A6NNV3 312 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 ERI2A8K979 691 aaKnown RBP10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 RNF103O00237 685 aa10.34□□□□□ -0.75
TRAPPC6B-202ENST00000347691 MATN2O00339 956 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms