RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 AIM2O14862 343 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 ELK3P41970 407 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 CLK3P49761 638 aaKnown RBP11.12□□□□□ -0.63
CLCN6-202ENST00000346436 PTPN11Q06124 597 aaPredicted RBP11.12□□□□□ -0.63
CLCN6-202ENST00000346436 MYBPC2Q14324 1141 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 PDK2Q15119 407 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 FAM182AQ5T1J6 154 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 MAP4K3Q8IVH8 894 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 TDRD5Q8NAT2 981 aaKnown RBP11.12□□□□□ -0.63
CLCN6-202ENST00000346436 CYP39A1Q9NYL5 469 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 DRG1Q9Y295 367 aaKnown RBP11.12□□□□□ -0.63
CLCN6-202ENST00000346436 SRP72O76094 671 aaKnown RBP11.12□□□□□ -0.63
CLCN6-202ENST00000346436 GPC1P35052 558 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 SPRP35270 261 aaPredicted RBP11.12□□□□□ -0.63
CLCN6-202ENST00000346436 LBX1P52954 281 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 ITGA9Q13797 1035 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 BMT2Q1RMZ1 405 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 RASGEF1CQ8N431 466 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 TMEM176AQ96HP8 235 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 TBC1D13Q9NVG8 400 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 BARX2Q9UMQ3 279 aaPredicted RBP11.12□□□□□ -0.63
CLCN6-202ENST00000346436 FAF1Q9UNN5 650 aaPredicted RBP11.12□□□□□ -0.63
CLCN6-202ENST00000346436 ZNF711Q9Y462 761 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 O00370 1275 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 DNM1LO00429 736 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 HS6ST1O60243 411 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 TSPAN3O60637 253 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 CYP1A2P05177 515 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 ZCCHC18P0CG32 403 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 JAK1P23458 1154 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 CXCR2P25025 360 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 CLK2P49760 499 aaKnown RBP11.12□□□□□ -0.63
CLCN6-202ENST00000346436 JAM2P57087 298 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 SLC20A2Q08357 652 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 USP10Q14694 798 aaKnown RBP11.12□□□□□ -0.63
CLCN6-202ENST00000346436 CCDC60Q8IWA6 550 aaPredicted RBP11.12□□□□□ -0.63
CLCN6-202ENST00000346436 LGI2Q8N0V4 545 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 CASP10Q92851 521 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 ABCC13Q9NSE7 274 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 NDRG2Q9UN36 371 aaKnown RBP11.12□□□□□ -0.63
CLCN6-202ENST00000346436 BCL9LQ86UU0 1499 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 PFDN1O60925 122 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 HSPA1AP0DMV8 641 aaKnown RBP11.12□□□□□ -0.63
CLCN6-202ENST00000346436 HSPA1BP0DMV9 641 aaKnown RBP11.12□□□□□ -0.63
CLCN6-202ENST00000346436 MLNP12872 115 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 CREB1P16220 341 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 PRKCZQ05513 592 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 FBXO46Q6PJ61 603 aaPredicted RBP11.12□□□□□ -0.63
CLCN6-202ENST00000346436 LRRC6Q86X45 466 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 C10orf53Q8N6V4 93 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 TMEM161BQ8NDZ6 487 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 BSNDQ8WZ55 320 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 CNPPD1Q9BV87 410 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 SIX2Q9NPC8 291 aa11.12□□□□□ -0.63
CLCN6-202ENST00000346436 MRPL42Q9Y6G3 142 aaKnown RBP11.12□□□□□ -0.63
CLCN6-202ENST00000346436 ZSCAN9O15535 394 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-202ENST00000346436 SPAG6O75602 509 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 ITGB6P18564 788 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 CYP2A7P20853 494 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 MAMLD1Q13495 774 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 YTHDF3Q7Z739 585 aaKnown RBP11.11□□□□□ -0.63
CLCN6-202ENST00000346436 ATXN2LQ8WWM7 1075 aaKnown RBP11.11□□□□□ -0.63
CLCN6-202ENST00000346436 VMP1Q96GC9 406 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 SENP8Q96LD8 212 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 CNPY3Q9BT09 278 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 FRMD8P1Q9BZ68 369 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-202ENST00000346436 CAPN10Q9HC96 672 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 SYTL2Q9HCH5 934 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 ST3GAL5Q9UNP4 418 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 ENDOD1O94919 500 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 ENO3P13929 434 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-202ENST00000346436 OR1E1P30953 314 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 SOAT1P35610 550 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 MLH1P40692 756 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 AQP5P55064 265 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 GCNT1Q02742 428 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 FLCNQ8NFG4 579 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 NAF1Q96HR8 494 aaKnown RBP11.11□□□□□ -0.63
CLCN6-202ENST00000346436 CERS4Q9HA82 394 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 TIMM13Q9Y5L4 95 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-202ENST00000346436 SMIM35A0A1B0GVV1 85 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 OR56A5P0C7T3 313 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 ERVK-21P61565 698 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 FOXD4Q12950 439 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-202ENST00000346436 NPNTQ6UXI9 565 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 ZCCHC23Q6ZST2 131 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 CACUL1Q86Y37 369 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 EIF1ADQ8N9N8 165 aaKnown RBP11.11□□□□□ -0.63
CLCN6-202ENST00000346436 PPTC7Q8NI37 304 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 MARCH2Q9P0N8 246 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 PMPCBO75439 489 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 RECQL4O94761 1208 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 NUDT17P0C025 328 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 LRRC74AQ0VAA2 488 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 INSCQ1MX18 579 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 TPGS1Q6ZTW0 290 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 SH3BP5LQ7L8J4 393 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 NPAS4Q8IUM7 802 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 TRIML2Q8N7C3 387 aa11.11□□□□□ -0.63
CLCN6-202ENST00000346436 SPPL2BQ8TCT7 592 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms