RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 KLHL20Q9Y2M5 609 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 CRYL1Q9Y2S2 319 aa15.3■□□□□ 0.04
UBE3B-202ENST00000342494 FGF10O15520 208 aaPredicted RBP15.29■□□□□ 0.04
UBE3B-202ENST00000342494 ACAP1Q15027 740 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 NCF4Q15080 339 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 STK40Q8N2I9 435 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 CATP04040 527 aaKnown RBP15.29■□□□□ 0.04
UBE3B-202ENST00000342494 BGNP21810 368 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 TRAF2Q12933 501 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 PCBP1Q15365 356 aaKnown RBP eCLIP15.29■□□□□ 0.04
UBE3B-202ENST00000342494 PKN2Q16513 984 aaKnown RBP15.29■□□□□ 0.04
UBE3B-202ENST00000342494 MOB2Q70IA6 237 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 CYP4Z2PQ8N1L4 340 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 TRPC4APQ8TEL6 797 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 SLC35C1Q96A29 364 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 PIF1Q9H611 641 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 MID1IP1Q9NPA3 183 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 OR12D3Q9UGF7 316 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 CDH9Q9ULB4 789 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 GNRH1P01148 92 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 CD52P31358 61 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 ZC3H12AQ5D1E8 599 aaKnown RBP15.29■□□□□ 0.04
UBE3B-202ENST00000342494 N4BP2L1Q5TBK1 243 aaPredicted RBP15.29■□□□□ 0.04
UBE3B-202ENST00000342494 FAM180AQ6UWF9 173 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 SPPL2AQ8TCT8 520 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 RHBGQ9H310 441 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 ARL15Q9NXU5 204 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 NPR3P17342 541 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 GNA13Q14344 377 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 KCTD14Q9BQ13 255 aaPredicted RBP15.29■□□□□ 0.04
UBE3B-202ENST00000342494 PTPRHQ9HD43 1115 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 ZMYM5Q9UJ78 669 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 ENTPD4Q9Y227 616 aa15.29■□□□□ 0.04
UBE3B-202ENST00000342494 TM9SF1O15321 606 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 TRUB2O95900 331 aaKnown RBP15.28■□□□□ 0.04
UBE3B-202ENST00000342494 PSEN1P49768 467 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 WDR59Q6PJI9 974 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 MFSD7Q6UXD7 560 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 REXO1L1PQ8IX06 675 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 DNAJC1Q96KC8 554 aaKnown RBP15.28■□□□□ 0.04
UBE3B-202ENST00000342494 CPNE1Q99829 537 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 ZFYVE1Q9HBF4 777 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 PIK3CGP48736 1102 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 SERPINH1P50454 418 aaKnown RBP15.28■□□□□ 0.04
UBE3B-202ENST00000342494 CCR4P51679 360 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 PAGE2BQ5JRK9 111 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 CES3Q6UWW8 571 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 KIAA2013Q8IYS2 634 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 LPPQ93052 612 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 GFM2Q969S9 779 aaKnown RBP15.28■□□□□ 0.04
UBE3B-202ENST00000342494 CNBD2Q96M20 576 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 MRIQ9BWK5 157 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 LACRTQ9GZZ8 138 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 PRKAG3Q9UGI9 489 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 RGS5O15539 181 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 GUCY1B2O75343 617 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 PABPC1P11940 636 aaKnown RBP15.28■□□□□ 0.04
UBE3B-202ENST00000342494 GLRA2P23416 452 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 CYP2C18P33260 490 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 IRAK1P51617 712 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 CRYMQ14894 314 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 TCEA2Q15560 299 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 CCDC153Q494R4 210 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 DENND1CQ8IV53 801 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 NKX2-3Q8TAU0 364 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 CXorf40BQ96DE9 158 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 POLR1AO95602 1720 aaPredicted RBP15.28■□□□□ 0.04
UBE3B-202ENST00000342494 ANKDD1BA6NHY2 528 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 PSMD5Q16401 504 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 POM121L1PQ3SYA9 428 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 CDKAL1Q5VV42 579 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 C18orf25Q96B23 403 aaPredicted RBP15.28■□□□□ 0.04
UBE3B-202ENST00000342494 PHACTR1Q9C0D0 580 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 SH3BGRLO75368 114 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 PYGMP11217 842 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 SLC12A3P55017 1021 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 RBM23Q86U06 439 aaKnown RBP15.28■□□□□ 0.04
UBE3B-202ENST00000342494 OPTCQ9UBM4 332 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 ZNF112Q9UJU3 913 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 ST3GAL5Q9UNP4 418 aa15.28■□□□□ 0.04
UBE3B-202ENST00000342494 A0A1B0GW55 424 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 H3BMM5 538 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 PDE2AO00408 941 aaPredicted RBP15.27■□□□□ 0.04
UBE3B-202ENST00000342494 DUX4L2P0CJ85 424 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 DUX4L3P0CJ86 424 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 DUX4L4P0CJ87 422 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 DUX4L5P0CJ88 424 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 DUX4L6P0CJ89 424 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 DUX4L7P0CJ90 424 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 DGKAP23743 735 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 MAPK8P45983 427 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 CLK2P49760 499 aaKnown RBP15.27■□□□□ 0.04
UBE3B-202ENST00000342494 RAET1GQ6H3X3 334 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 DUX4Q9UBX2 424 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 A0A096LPK6 155 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 TBL1XO60907 577 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 EIF2S1P05198 315 aaKnown RBP15.27■□□□□ 0.04
UBE3B-202ENST00000342494 GPR1P46091 355 aa15.27■□□□□ 0.04
UBE3B-202ENST00000342494 EARS2Q5JPH6 523 aaKnown RBP15.27■□□□□ 0.04
UBE3B-202ENST00000342494 ICE2Q659A1 982 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms