RNA–Protein interactions for RNA: ENST00000340369.3

XIRP1-201, Transcript of xin actin binding repeat containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XIRP1, Length 6,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-201ENST00000340369 TBC1D3Q8IZP1 549 aaPredicted RBP12.88□□□□□ -0.35
XIRP1-201ENST00000340369 KLHL25Q9H0H3 589 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 NFKBIEO00221 500 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 CDH8P55286 799 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 KCNMA1Q12791 1236 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 PDK2Q15119 407 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 OASLQ15646 514 aaKnown RBP12.88□□□□□ -0.35
XIRP1-201ENST00000340369 KDM7AQ6ZMT4 941 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 DENND1CQ8IV53 801 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 SIX5Q8N196 739 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 HDDC3Q8N4P3 179 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 SLC2A14Q8TDB8 520 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 ACOX2Q99424 681 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 PABPC3Q9H361 631 aaKnown RBP12.88□□□□□ -0.35
XIRP1-201ENST00000340369 BTBD7Q9P203 1132 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 CAMTA1Q9Y6Y1 1673 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 TRIM13O60858 407 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 RAMP2O60895 175 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 NFICP08651 508 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 ALDH9A1P49189 494 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 VEGFBP49765 207 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 CSNK2BP67870 215 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 COX10Q12887 443 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 ITIH4Q14624 930 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 TARBP2Q15633 366 aaKnown RBP12.88□□□□□ -0.35
XIRP1-201ENST00000340369 CCL14Q16627 93 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 DAGLBQ8NCG7 672 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 C19orf60Q96EN9 201 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 RIOX1Q9H6W3 641 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 RGS18Q9NS28 235 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 LGR5O75473 907 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 ABCB1P08183 1280 aaPredicted RBP12.88□□□□□ -0.35
XIRP1-201ENST00000340369 C4BPBP20851 252 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 CCNG1P51959 295 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 MED8Q96G25 268 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 TMEM121Q9BTD3 319 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 TTPALQ9BTX7 342 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 HDHD2Q9H0R4 259 aa12.88□□□□□ -0.35
XIRP1-201ENST00000340369 TRIM24O15164 1050 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 BAIAP3O94812 1187 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 CRTAMO95727 393 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 ATP12AP54707 1039 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 MTSS1LQ765P7 747 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 C16orf62Q7Z3J2 963 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 PTAR1Q7Z6K3 402 aaPredicted RBP12.87□□□□□ -0.35
XIRP1-201ENST00000340369 SYTL1Q8IYJ3 562 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 UXS1Q8NBZ7 420 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.87□□□□□ -0.35
XIRP1-201ENST00000340369 MAML3Q96JK9 1138 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 SERPINB11Q96P15 392 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 PAFAH2Q99487 392 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 SIKE1Q9BRV8 207 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 GPAMQ9HCL2 828 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 MARCH2Q9P0N8 246 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 DNMT3LQ9UJW3 386 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 CNOT3O75175 753 aaKnown RBP12.87□□□□□ -0.35
XIRP1-201ENST00000340369 GLP2RO95838 553 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 BGNP21810 368 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 VAC14Q08AM6 782 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 TRPC4APQ8TEL6 797 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 CELF6Q96J87 481 aaKnown RBP12.87□□□□□ -0.35
XIRP1-201ENST00000340369 CARD9Q9H257 536 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 USP18Q9UMW8 372 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 ERI2A8K979 691 aaKnown RBP12.87□□□□□ -0.35
XIRP1-201ENST00000340369 FAM86B1E9PN63 330 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 CAPN1P07384 714 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 FAM86B2P0C5J1 330 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 TUBP50607 506 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 INSCQ1MX18 579 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 DGKKQ5KSL6 1271 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 C11orf88Q6PI97 169 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 MRPL48Q96GC5 212 aaKnown RBP12.87□□□□□ -0.35
XIRP1-201ENST00000340369 FAM163AQ96GL9 167 aaPredicted RBP12.87□□□□□ -0.35
XIRP1-201ENST00000340369 KLHL4Q9C0H6 718 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 MIEF1Q9NQG6 463 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 UBP1Q9NZI7 540 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 GPN3Q9UHW5 284 aaPredicted RBP12.87□□□□□ -0.35
XIRP1-201ENST00000340369 PIPSLA2A3N6 862 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 NEDD8-MDP1E9PL57 170 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 TBL1XO60907 577 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 IFNA14P01570 189 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 ITGB6P18564 788 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 ATP6V1C1P21283 382 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 CDC25CP30307 473 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 RENBPP51606 427 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 IL5RAQ01344 420 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 CCNJLQ8IV13 435 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 ERGIC2Q96RQ1 377 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 CREBZFQ9NS37 354 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 CISHQ9NSE2 258 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 TAGLN3Q9UI15 199 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 ADAM30Q9UKF2 790 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 C3P01024 1663 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 YBX3P16989 372 aaKnown RBP eCLIP12.87□□□□□ -0.35
XIRP1-201ENST00000340369 KRR1Q13601 381 aaKnown RBP12.87□□□□□ -0.35
XIRP1-201ENST00000340369 PLEKHA7Q6IQ23 1121 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 MTDHQ86UE4 582 aaKnown RBP12.87□□□□□ -0.35
XIRP1-201ENST00000340369 PPTC7Q8NI37 304 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 ELMO3Q96BJ8 720 aa12.87□□□□□ -0.35
XIRP1-201ENST00000340369 WHRNQ9P202 907 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms