RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 NUP205Q92621 2012 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 IGLV3-10A0A075B6K4 115 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 DRGXA6NNA5 263 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 WASH3PC4AMC7 463 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 FAM72CH0Y354 149 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 CYP1A2P05177 515 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 HOXB2P14652 356 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 POLR2EP19388 210 aaKnown RBP15.71■□□□□ 0.11
UBE3B-201ENST00000340074 HOXA6P31267 233 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 DGKEP52429 567 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 NRLP54845 237 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 CDH4P55283 916 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 ZNF234Q14588 700 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 ALFQ53S48 1182 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 FAM72AQ5TYM5 149 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 FAM72DQ6L9T8 149 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 CXorf57Q6NSI4 855 aaKnown RBP15.71■□□□□ 0.11
UBE3B-201ENST00000340074 FAM72BQ86X60 149 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 ARFGAP1Q8N6T3 406 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 ZBTB44Q8NCP5 570 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 ERLEC1Q96DZ1 483 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 PHOX2BQ99453 314 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 NUP85Q9BW27 656 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 OSBPL2Q9H1P3 480 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 INTS6Q9UL03 887 aaKnown RBP15.71■□□□□ 0.11
UBE3B-201ENST00000340074 STON1Q9Y6Q2 735 aa15.71■□□□□ 0.11
UBE3B-201ENST00000340074 PLXND1Q9Y4D7 1925 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.7■□□□□ 0.1
UBE3B-201ENST00000340074 CLDN11O75508 207 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 RNF8O76064 485 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 APBB3O95704 486 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 MZF1P28698 734 aaPredicted RBP15.7■□□□□ 0.1
UBE3B-201ENST00000340074 CSKP41240 450 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 NBL1P41271 181 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 IL12RB1P42701 662 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 NUMBP49757 651 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 NRG1Q02297 640 aaPredicted RBP15.7■□□□□ 0.1
UBE3B-201ENST00000340074 SCAPQ12770 1279 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 ZNF177Q13360 481 aaPredicted RBP15.7■□□□□ 0.1
UBE3B-201ENST00000340074 PTPRNQ16849 979 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 PITRM1Q5JRX3 1037 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 ZC3H14Q6PJT7 736 aaKnown RBP15.7■□□□□ 0.1
UBE3B-201ENST00000340074 TFAP2DQ7Z6R9 452 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 APCDD1Q8J025 514 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 TSTD1Q8NFU3 115 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 OR52K2Q8NGK3 314 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 ATRIPQ8WXE1 791 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 BTBD6Q96KE9 485 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 GABRG3Q99928 467 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 POLMQ9NP87 494 aaPredicted RBP15.7■□□□□ 0.1
UBE3B-201ENST00000340074 FZD10Q9ULW2 581 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 PCDHGA2Q9Y5H1 932 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 RAD54BQ9Y620 910 aa15.7■□□□□ 0.1
UBE3B-201ENST00000340074 A0A1W2PQF6 199 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 NPC1O15118 1278 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 ATP5BP06576 529 aaKnown RBP15.69■□□□□ 0.1
UBE3B-201ENST00000340074 H2AFZP0C0S5 128 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 AIF1P55008 147 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 ENPP2Q13822 863 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 E2F5Q15329 346 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 PLEKHG6Q3KR16 790 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 EFHC2Q5JST6 749 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 MANEALQ5VSG8 457 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 DAB2IPQ5VWQ8 1189 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 ANO7Q6IWH7 933 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 KIAA1211LQ6NV74 962 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 H2AFVQ71UI9 128 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 LONP2Q86WA8 852 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 PYROXD2Q8N2H3 581 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 CTNNBL1Q8WYA6 563 aaPredicted RBP15.69■□□□□ 0.1
UBE3B-201ENST00000340074 TTC17Q96AE7 1141 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 ZYG11BQ9C0D3 744 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 PPARGC1AQ9UBK2 798 aaKnown RBP15.69■□□□□ 0.1
UBE3B-201ENST00000340074 ANAPC7Q9UJX3 599 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 PLA2G4CQ9UP65 541 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 TBC1D30Q9Y2I9 924 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 WDR87Q6ZQQ6 2873 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 THADAQ6YHU6 1953 aa15.69■□□□□ 0.1
UBE3B-201ENST00000340074 TCRBV21S2A2A0A5A6 115 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 LILRB5O75023 590 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 LRCH4O75427 683 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 ALDH1A2O94788 518 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 LRIG2O94898 1065 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 MOCS3O95396 460 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 DLDP09622 509 aaKnown RBP15.68■□□□□ 0.1
UBE3B-201ENST00000340074 PRKCHP24723 683 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 MIPP30301 263 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 CDC25BP30305 580 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 CTSOP43234 321 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-201ENST00000340074 OXCT1P55809 520 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 SLC12A1Q13621 1099 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 FNDC3BQ53EP0 1204 aaKnown RBP15.68■□□□□ 0.1
UBE3B-201ENST00000340074 RWDD4Q6NW29 188 aaKnown RBP15.68■□□□□ 0.1
UBE3B-201ENST00000340074 SERPINA13PQ6UXR4 307 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 WDR5BQ86VZ2 330 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 MDGA1Q8NFP4 955 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 ZNF564Q8TBZ8 553 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-201ENST00000340074 ALG14Q96F25 216 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 PANX2Q96RD6 677 aa15.68■□□□□ 0.1
UBE3B-201ENST00000340074 PEBP4Q96S96 227 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms