RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 DYDC1Q8WWB3 177 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 CENPTQ96BT3 561 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 OXNAD1Q96HP4 312 aaPredicted RBP7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 EPAS1Q99814 870 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 ELAC2Q9BQ52 826 aaKnown RBP7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 TTPALQ9BTX7 342 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 MLPHQ9BV36 600 aaPredicted RBP7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 STMN4Q9H169 189 aaPredicted RBP7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 SMOC2Q9H3U7 446 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 SLCO1B3Q9NPD5 702 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 SYBUQ9NX95 663 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 SLC17A7Q9P2U7 560 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 HACD1B0YJ81 288 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 E9PAM4 449 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 EBAG9O00559 213 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 HGSO14964 777 aaPredicted RBP7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 PPP1R12AO14974 1030 aaPredicted RBP7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 TYROBPO43914 113 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 NFKB1P19838 968 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 HCAR3P49019 387 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 ALDH7A1P49419 539 aaKnown RBP7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 KCNQ1P51787 676 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 PGGT1BP53609 377 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 PPIDQ08752 370 aaKnown RBP7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 GPR17Q13304 367 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 CDHR3Q6ZTQ4 885 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 SCML4Q8N228 414 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 MCUQ8NE86 351 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 DENND1AQ8TEH3 1009 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 SLC44A1Q8WWI5 657 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 FBXO32Q969P5 355 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 SEC16BQ96JE7 1060 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 C8orf48Q96LL4 319 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 ZNF778Q96MU6 729 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 FCRL3Q96P31 734 aaPredicted RBP7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 CYTH2Q99418 400 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 EBNA1BP2Q99848 306 aaKnown RBP7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 NOL6Q9H6R4 1146 aaKnown RBP7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 CWH43Q9H720 699 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 SAGE1Q9NXZ1 904 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 PSAT1Q9Y617 370 aa7.59□□□□□ -1.19
SRFBP1-201ENST00000339397 SF3B1O75533 1304 aaKnown RBP eCLIP7.59□□□□□ -1.191e-6■■■■■ 66.8
SRFBP1-201ENST00000339397 FAM47DPA6NHR8 397 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 GOLGA8TH3BQL2 631 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 OPHN1O60890 802 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 SEC24AO95486 1093 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 APOEP02649 317 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 CXCL10P02778 98 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 CSF2RAP15509 400 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 CA4P22748 312 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 YWHAQP27348 245 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 PHBP35232 272 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 AIF1P55008 147 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 MLLT6P55198 1093 aaPredicted RBP7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 PRMT2P55345 433 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 GALNT2Q10471 571 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 TEX44Q53QW1 395 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 C10orf120Q5SQS8 335 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 CERCAMQ5T4B2 595 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 MANEALQ5VSG8 457 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 NUGGCQ68CJ6 796 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 PPP1R21Q6ZMI0 780 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 CEP128Q6ZU80 1094 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 FAM47EQ6ZV65 393 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 BZW1Q7L1Q6 419 aaKnown RBP7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 PNPLA1Q8N8W4 532 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 IGSF8Q969P0 613 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 SLC39A13Q96H72 371 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 FUBP3Q96I24 572 aaKnown RBP eCLIP7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 PAWRQ96IZ0 340 aaKnown RBP7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 OSBPL2Q9H1P3 480 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 ATXN3LQ9H3M9 355 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 TMEM39AQ9NV64 488 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 RRN3Q9NYV6 651 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 SLC24A2Q9UI40 661 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 FAM169AQ9Y6X4 670 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 E2F8A0AVK6 867 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 A6NNZ2 444 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 TRDMT1O14717 391 aaKnown RBP7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 MAFKO60675 156 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 GJB3O75712 270 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 ASMTLO95671 621 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 CPP00450 1065 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 SPATA31D3P0C874 917 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 ERVK-10P10266 1014 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 HAPLN1P10915 354 aaPredicted RBP7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 PYGBP11216 843 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 TPSB2P20231 275 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 ADRA1DP25100 572 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 STX2P32856 288 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 ABCG1P45844 678 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 DNAJC3Q13217 504 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 TPSAB1Q15661 275 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 LRRC26Q2I0M4 334 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 PARP6Q2NL67 630 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 TUBB8Q3ZCM7 444 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 MROH9Q5TGP6 573 aa7.58□□□□□ -1.2
SRFBP1-201ENST00000339397 TMCO4Q5TGY1 634 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms