RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 GDF6Q6KF10 455 aaPredicted RBP19.27■□□□□ 0.68
PSPC1-201ENST00000338910 TAF2Q6P1X5 1199 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 CYP4V2Q6ZWL3 525 aaPredicted RBP19.27■□□□□ 0.68
PSPC1-201ENST00000338910 NUDCD3Q8IVD9 361 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 RBM12BQ8IXT5 1001 aaKnown RBP19.27■□□□□ 0.68
PSPC1-201ENST00000338910 SLC26A7Q8TE54 656 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 KHSRPQ92945 711 aaKnown RBP eCLIP19.27■□□□□ 0.686e-7■■■□□ 14.8
PSPC1-201ENST00000338910 PNPLA8Q9NP80 782 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 GTF2IRD1Q9UHL9 959 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 SEPT4O43236 478 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 KPNA6O60684 536 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 TMCC1O94876 653 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 ALDH1A1P00352 501 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 SNRPAP09012 282 aaKnown RBP19.27■□□□□ 0.68
PSPC1-201ENST00000338910 FAM200BP0CF97 657 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 DPYSL3Q14195 570 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 PGM2L1Q6PCE3 622 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 FBXL19Q6PCT2 694 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 FAM71DQ8N9W8 422 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 RAB3IL1Q8TBN0 382 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 CLEC4CQ8WTT0 213 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 WNT8BQ93098 351 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 ZFP42Q96MM3 310 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 PRICKLE1Q96MT3 831 aaPredicted RBP19.27■□□□□ 0.68
PSPC1-201ENST00000338910 SNX25Q9H3E2 840 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 SPC25Q9HBM1 224 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 GPATCH2LQ9NWQ4 482 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 MKS1Q9NXB0 559 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 GMEB1Q9Y692 573 aa19.27■□□□□ 0.68
PSPC1-201ENST00000338910 SCN10AQ9Y5Y9 1956 aa19.27■□□□□ 0.67
PSPC1-201ENST00000338910 TTC36A6NLP5 189 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 ZSCAN9O15535 394 aaPredicted RBP19.26■□□□□ 0.67
PSPC1-201ENST00000338910 HNRNPRO43390 633 aaKnown RBP19.26■□□□□ 0.67
PSPC1-201ENST00000338910 RFPL1O75677 317 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 KRT37O76014 449 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 KCNE1P15382 129 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 ELNP15502 786 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 FAM182AQ5T1J6 154 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 NPNTQ6UXI9 565 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 APPL2Q8NEU8 664 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 JADE3Q92613 823 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 ZNF180Q9UJW8 692 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 TTLL3Q9Y4R7 772 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 VILLO15195 856 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 CTSHP09668 335 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 TAF6P49848 677 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 SCNN1BP51168 640 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 BTKQ06187 659 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 TUBB3Q13509 450 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 XKR4Q5GH76 650 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 RALGPS1Q5JS13 557 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 PPM1NQ8N819 430 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 BTBD9Q96Q07 612 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 RSAD1Q9HA92 442 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 SSX2IPQ9Y2D8 614 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 CDY2AQ9Y6F7 541 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 RALGAPA2Q2PPJ7 1873 aa19.26■□□□□ 0.67
PSPC1-201ENST00000338910 C15orf38-AP3S2A0A0A6YYH1 394 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 MEIS3P2A8K0S8 358 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 CASQ2O14958 399 aaPredicted RBP19.25■□□□□ 0.67
PSPC1-201ENST00000338910 PGM3O95394 542 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 LCP1P13796 627 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 IGFBP6P24592 240 aaPredicted RBP19.25■□□□□ 0.67
PSPC1-201ENST00000338910 CCND3P30281 292 aaPredicted RBP19.25■□□□□ 0.67
PSPC1-201ENST00000338910 SDC4P31431 198 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 NRLP54845 237 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 EIF3EP60228 445 aaKnown RBP19.25■□□□□ 0.67
PSPC1-201ENST00000338910 SH2D4BQ5SQS7 431 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 ARPINQ7Z6K5 226 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 SPATA18Q8TC71 538 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 ZNF560Q96MR9 790 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 XPNPEP3Q9NQH7 507 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 RNF186Q9NXI6 227 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 CACNG4Q9UBN1 327 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 APOC4-APOC2K7ER74 178 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 XPOTO43592 962 aaKnown RBP19.25■□□□□ 0.67
PSPC1-201ENST00000338910 APOC2P02655 101 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 TFE3P19532 575 aaPredicted RBP19.25■□□□□ 0.67
PSPC1-201ENST00000338910 LILRA4P59901 499 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 MRPS6P82932 125 aaKnown RBP19.25■□□□□ 0.67
PSPC1-201ENST00000338910 RABGAP1LQ5R372 815 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 ARHGAP17Q68EM7 881 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 CTAGE3PQ8IX95 158 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 CRYBG2Q8N1P7 616 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 ANKRD52Q8NB46 1076 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 SLC2A14Q8TDB8 520 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 SLC13A1Q9BZW2 595 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 UPF3AQ9H1J1 476 aaKnown RBP19.25■□□□□ 0.67
PSPC1-201ENST00000338910 GDAP2Q9NXN4 497 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 CIDEBQ9UHD4 219 aa19.25■□□□□ 0.67
PSPC1-201ENST00000338910 CXorf49A8MYA2 514 aaPredicted RBP19.24■□□□□ 0.67
PSPC1-201ENST00000338910 PEX1O43933 1283 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 HUS1O60921 280 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 ADAMTS4O75173 837 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 SORBS2O94875 1100 aaKnown RBP19.24■□□□□ 0.67
PSPC1-201ENST00000338910 ASGR1P07306 291 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 BPGMP07738 259 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 SETSIPP0DME0 302 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 RBP3P10745 1247 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 KRT81Q14533 505 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms