RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 SGCGQ13326 291 aa9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 SLC29A2Q14542 456 aa9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 GET4Q7L5D6 327 aaPredicted RBP9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 EIF1ADQ8N9N8 165 aaKnown RBP9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 FBXO36Q8NEA4 188 aa9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 CCDC126Q96EE4 140 aa9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 TOX2Q96NM4 488 aa9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 PCDHB18PQ96TA0 734 aa9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 MFSD1Q9H3U5 465 aa9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 PCYOX1Q9UHG3 505 aa9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 FAM47DPA6NHR8 397 aa9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 C1QTNF3-AMACRE9PGA6 284 aa9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 MTA2O94776 668 aa9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 MYL2P10916 166 aa9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 CORO1AP31146 461 aaKnown RBP9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 ADRA1BP35368 520 aa9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 SF3A3Q12874 501 aaKnown RBP eCLIP9.53□□□□□ -0.889e-7■■■□□ 14.9
FNDC3B-201ENST00000336824 KIF19Q2TAC6 998 aa9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 TASP1Q9H6P5 420 aa9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 TXLNGQ9NUQ3 528 aa9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 SBF1O95248 1867 aa9.53□□□□□ -0.88
FNDC3B-201ENST00000336824 PCDH8O95206 1070 aa9.52□□□□□ -0.88
FNDC3B-201ENST00000336824 DAOAP59103 153 aa9.52□□□□□ -0.88
FNDC3B-201ENST00000336824 UPP1Q16831 310 aa9.52□□□□□ -0.88
FNDC3B-201ENST00000336824 LONRF1Q17RB8 773 aa9.52□□□□□ -0.88
FNDC3B-201ENST00000336824 MFSD5Q6N075 450 aa9.52□□□□□ -0.88
FNDC3B-201ENST00000336824 GLT6D1Q7Z4J2 308 aa9.52□□□□□ -0.88
FNDC3B-201ENST00000336824 SPATA16Q9BXB7 569 aa9.52□□□□□ -0.88
FNDC3B-201ENST00000336824 hCG_1818297A0A087WSY0 165 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 KCNK1O00180 336 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 KIF3CO14782 793 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 MAP3K13O43283 966 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 FGF18O76093 207 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 SYF2O95926 243 aaKnown RBP9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 SOD2P04179 222 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 NCF2P19878 526 aaPredicted RBP9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 SLC12A1Q13621 1099 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 SCARA3Q6AZY7 606 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 PRSS55Q6UWB4 352 aaPredicted RBP9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 TAS1R3Q7RTX0 852 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 KAT2BQ92831 832 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 PNPLA8Q9NP80 782 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 SIX2Q9NPC8 291 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 NVLO15381 856 aaKnown RBP9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 CREG2Q8IUH2 290 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 TNS4Q8IZW8 715 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 CFAP97Q9P2B7 532 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 BAG5Q9UL15 447 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 DOCK3Q8IZD9 2030 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 PIRO00625 290 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 SRP72O76094 671 aaKnown RBP9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 PTP4A2Q12974 167 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 ZSCAN26Q16670 478 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 KCTD13Q8WZ19 329 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 FAM84AQ96KN4 292 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 EPC1Q9H2F5 836 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 PKD2L2Q9NZM6 624 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 PRR23AA6NEV1 266 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 H2AFYO75367 372 aaKnown RBP9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 CSF2RAP15509 400 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 ERCC2P18074 760 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 NAB1Q13506 487 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 FAM46CQ5VWP2 391 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 TFAP2BQ92481 460 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 BRD9Q9H8M2 597 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 MAFFQ9ULX9 164 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 ART3Q13508 389 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 RCN2Q14257 317 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 SMAD1Q15797 465 aaKnown RBP9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 TTC31Q49AM3 519 aaPredicted RBP9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 SNX19Q92543 992 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 LRRC19Q9H756 370 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 DCDC2Q9UHG0 476 aa9.52□□□□□ -0.89
FNDC3B-201ENST00000336824 GRM6O15303 877 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 PGAM1P18669 254 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 CALRP27797 417 aaKnown RBP9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 RBL1P28749 1068 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 SLC11A1P49279 550 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 MPP3Q13368 585 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 FBXL19Q6PCT2 694 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 LPCAT1Q8NF37 534 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 HAPLN3Q96S86 360 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 SLC24A2Q9UI40 661 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 LIASO43766 372 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 UNGP13051 313 aaPredicted RBP9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 RBBP5Q15291 538 aaKnown RBP9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 TRIM48Q8IWZ4 208 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 HSD3B7Q9H2F3 369 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 SUDS3Q9H7L9 328 aaPredicted RBP9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 HSD17B3P37058 310 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 SERPINH1P50454 418 aaKnown RBP9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 YBEYP58557 167 aaPredicted RBP9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 POU6F1Q14863 301 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 CASP10Q92851 521 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 PCMTD2Q9NV79 361 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 UBP1Q9NZI7 540 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 CD274Q9NZQ7 290 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 SLC39A10Q9ULF5 831 aa9.51□□□□□ -0.89
FNDC3B-201ENST00000336824 SPAG7O75391 227 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms