RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 DHX8Q14562 1220 aaKnown RBP15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 CDKN3Q16667 212 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 FOXD4L5Q5VV16 416 aaPredicted RBP15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 MBLAC2Q68D91 279 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 TBC1D3GQ6DHY5 549 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 TBC1D3CQ6IPX1 549 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 FAM173BQ6P4H8 233 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 GUSBP11Q6P575 273 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 EFL1Q7Z2Z2 1120 aaKnown RBP15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 KIAA0907Q7Z7F0 614 aaPredicted RBP15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 DENND1CQ8IV53 801 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 MMAAQ8IVH4 418 aaKnown RBP15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 TBC1D3Q8IZP1 549 aaPredicted RBP15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 AHI1Q8N157 1196 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 AADATQ8N5Z0 425 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 SSC4DQ8WTU2 575 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 FOXD4L4Q8WXT5 416 aaPredicted RBP15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 KLHDC7BQ96G42 594 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 USP28Q96RU2 1077 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 CAAP1Q9H8G2 361 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 GGA2Q9UJY4 613 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 CFAP45Q9UL16 551 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 CRYBG3Q68DQ2 2970 aa15.38■□□□□ 0.05
CTHRC1-201ENST00000330295 RP1L1Q8IWN7 2480 aaPredicted RBP15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 A1L4Q6 167 aa15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 SCAMP1O15126 338 aa15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 PRPF6O94906 941 aaKnown RBP15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 HMBSP08397 361 aa15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 PABPC1P11940 636 aaKnown RBP15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 MAT2AP31153 395 aaKnown RBP15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 NUDT1P36639 197 aa15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 NASPP49321 788 aaPredicted RBP15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 TNNC1P63316 161 aa15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 KCNMA1Q12791 1236 aa15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 DUOXA2Q1HG44 320 aa15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 RRAGBQ5VZM2 374 aa15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 CRTC1Q6UUV9 634 aa15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 CCDC73Q6ZRK6 1079 aa15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 ZNF720Q7Z2F6 126 aa15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 GPRIN1Q7Z2K8 1008 aa15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 TADA2BQ86TJ2 420 aa15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 FAM217AQ8IXS0 508 aa15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 FUKQ8N0W3 1084 aa15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 NOC3LQ8WTT2 800 aaKnown RBP15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 STK17AQ9UEE5 414 aa15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 FBXO2Q9UK22 296 aaPredicted RBP15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 CA5BQ9Y2D0 317 aa15.37■□□□□ 0.05
CTHRC1-201ENST00000330295 OTOGQ6ZRI0 2925 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 SPTLC2O15270 562 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 PPP1R37O75864 691 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 YEATS4O95619 227 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 F13A1P00488 732 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 GARTP22102 1010 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 UGT1A5P35504 534 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 DCTP40126 519 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 MAP3K7CLP57077 242 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 KCNA1Q09470 495 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 HNRNPA1L2Q32P51 320 aaKnown RBP15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 WDR72Q3MJ13 1102 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 POM121L1PQ3SYA9 428 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 MPPE1Q53F39 396 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 FHL5Q5TD97 284 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 ZCCHC8Q6NZY4 707 aaKnown RBP15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 FBXO39Q8N4B4 442 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 ZNF276Q8N554 614 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 MYO19Q96H55 970 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 CSNK1G1Q9HCP0 422 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 CYTH4Q9UIA0 394 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 RASAL2Q9UJF2 1139 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 NAGPAQ9UK23 515 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 EXOC7Q9UPT5 735 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 ATP6V1DQ9Y5K8 247 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 UBE4BO95155 1302 aa15.36■□□□□ 0.05
CTHRC1-201ENST00000330295 EME2A4GXA9 379 aaPredicted RBP15.35■□□□□ 0.05
CTHRC1-201ENST00000330295 PRAMEF26H0Y7S4 382 aa15.35■□□□□ 0.05
CTHRC1-201ENST00000330295 MTSS1O43312 755 aa15.35■□□□□ 0.05
CTHRC1-201ENST00000330295 PPP6R2O75170 966 aa15.35■□□□□ 0.05
CTHRC1-201ENST00000330295 NEBLO76041 1014 aa15.35■□□□□ 0.05
CTHRC1-201ENST00000330295 POLR2EP19388 210 aaKnown RBP15.35■□□□□ 0.05
CTHRC1-201ENST00000330295 PSMD8P48556 350 aa15.35■□□□□ 0.05
CTHRC1-201ENST00000330295 EIF3IQ13347 325 aaKnown RBP15.35■□□□□ 0.05
CTHRC1-201ENST00000330295 TRAPPC11Q7Z392 1133 aa15.35■□□□□ 0.05
CTHRC1-201ENST00000330295 SRRM1Q8IYB3 904 aaKnown RBP15.35■□□□□ 0.05
CTHRC1-201ENST00000330295 LINC00301Q8NCQ3 95 aa15.35■□□□□ 0.05
CTHRC1-201ENST00000330295 LARP4BQ92615 738 aaKnown RBP15.35■□□□□ 0.05
CTHRC1-201ENST00000330295 RAD54LQ92698 747 aa15.35■□□□□ 0.05
CTHRC1-201ENST00000330295 EPSTI1Q96J88 318 aa15.35■□□□□ 0.05
CTHRC1-201ENST00000330295 CBWD1Q9BRT8 395 aa15.35■□□□□ 0.05
CTHRC1-201ENST00000330295 NCKIPSDQ9NZQ3 722 aa15.35■□□□□ 0.05
CTHRC1-201ENST00000330295 TFIP11Q9UBB9 837 aaKnown RBP15.35■□□□□ 0.05
CTHRC1-201ENST00000330295 SLC12A8A0AV02 714 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 RIOK3O14730 519 aaKnown RBP15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 NVLO15381 856 aaKnown RBP15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 ADH1BP00325 375 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 CST3P01034 146 aaPredicted RBP15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 RNF224P0DH78 156 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 RALAP11233 206 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 C5AR1P21730 350 aa15.34■□□□□ 0.05
CTHRC1-201ENST00000330295 COL8A1P27658 744 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms