RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 CERS2Q96G23 380 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 AGAP3Q96P47 875 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 PGLYRP2Q96PD5 576 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 BTBD10Q9BSF8 475 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 CADM1Q9BY67 442 aaKnown RBP14.93□□□□□ -0.02
TPM3-206ENST00000330188 RRAGCQ9HB90 399 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 ZFATQ9P243 1243 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 HBS1LQ9Y450 684 aaKnown RBP14.93□□□□□ -0.02
TPM3-206ENST00000330188 RPS6KL1Q9Y6S9 549 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 TNPO2O14787 897 aaKnown RBP14.92□□□□□ -0.02
TPM3-206ENST00000330188 CALB2P22676 271 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 CD68P34810 354 aaPredicted RBP14.92□□□□□ -0.02
TPM3-206ENST00000330188 CXCR3P49682 368 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 ZNF157P51786 506 aaPredicted RBP14.92□□□□□ -0.02
TPM3-206ENST00000330188 GALNT2Q10471 571 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 STX3Q13277 289 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 FASTKD1Q53R41 847 aaKnown RBP14.92□□□□□ -0.02
TPM3-206ENST00000330188 WASHC2DQ5SRD0 308 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 KCTD11Q693B1 232 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 TLDC1Q6P9B6 456 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 MRPL10Q7Z7H8 261 aaKnown RBP14.92□□□□□ -0.02
TPM3-206ENST00000330188 TACO1Q9BSH4 297 aaKnown RBP14.92□□□□□ -0.02
TPM3-206ENST00000330188 BRD8Q9H0E9 1235 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 GBA3Q9H227 469 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 WDCPQ9H6R7 721 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 AGO3Q9H9G7 860 aaKnown RBP14.92□□□□□ -0.02
TPM3-206ENST00000330188 NKX1-2Q9UD57 310 aaPredicted RBP14.92□□□□□ -0.02
TPM3-206ENST00000330188 TDRD15B5MCY1 1934 aaKnown RBP14.92□□□□□ -0.02
TPM3-206ENST00000330188 NUP205Q92621 2012 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 PLIN3O60664 434 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 USP12O75317 370 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 KITP10721 976 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 CTGFP29279 349 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 GP5P40197 560 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 GARSP41250 739 aaKnown RBP14.92□□□□□ -0.02
TPM3-206ENST00000330188 ZBTB17Q13105 803 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 MBLAC2Q68D91 279 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 SERINC5Q86VE9 423 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 MLPHQ9BV36 600 aaPredicted RBP14.92□□□□□ -0.02
TPM3-206ENST00000330188 TKTL2Q9H0I9 626 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 DENND2DQ9H6A0 471 aaPredicted RBP14.92□□□□□ -0.02
TPM3-206ENST00000330188 LRRC40Q9H9A6 602 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 RNPEPL1Q9HAU8 725 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 CASS4Q9NQ75 786 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 THAP1Q9NVV9 213 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 ARMCX1Q9P291 453 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 MARCOQ9UEW3 520 aaPredicted RBP14.92□□□□□ -0.02
TPM3-206ENST00000330188 VANGL2Q9ULK5 521 aa14.92□□□□□ -0.02
TPM3-206ENST00000330188 RPL26L1Q9UNX3 145 aaKnown RBP14.92□□□□□ -0.02
TPM3-206ENST00000330188 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.92□□□□□ -0.02
TPM3-206ENST00000330188 LRIG2O94898 1065 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 PGK1P00558 417 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 PRKCGP05129 697 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 FGF3P11487 239 aaPredicted RBP14.91□□□□□ -0.02
TPM3-206ENST00000330188 ODC1P11926 461 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 MX2P20592 715 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 MAP2K2P36507 400 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 ZNF135P52742 658 aaPredicted RBP14.91□□□□□ -0.02
TPM3-206ENST00000330188 AQP5P55064 265 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 RPL10AP62906 217 aaKnown RBP14.91□□□□□ -0.02
TPM3-206ENST00000330188 PM20D1Q6GTS8 502 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 FAM171BQ6P995 826 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 RINLQ6ZS11 566 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 TAC4Q86UU9 113 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 NSMCE1Q8WV22 266 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 IRGQQ8WZA9 623 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 ZNF669Q96BR6 464 aaPredicted RBP14.91□□□□□ -0.02
TPM3-206ENST00000330188 EPAS1Q99814 870 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 CPNE1Q99829 537 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 WWP1Q9H0M0 922 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 OR12D3Q9UGF7 316 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 DCDC2Q9UHG0 476 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 PTPRDP23468 1912 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 PATJQ8NI35 1801 aa14.91□□□□□ -0.02
TPM3-206ENST00000330188 GPR182O15218 404 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 GSC2O15499 205 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 MTSS1O43312 755 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 MGEA5O60502 916 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 DIAPH2O60879 1101 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 ESRRAP11474 423 aaPredicted RBP14.9□□□□□ -0.02
TPM3-206ENST00000330188 BDNFP23560 247 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 PDE1BQ01064 536 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 GRTP1Q5TC63 336 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 CD300LGQ6UXG3 332 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 TMEM135Q86UB9 458 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 IFNL1Q8IU54 200 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 DPF3Q92784 378 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 ACBD6Q9BR61 282 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 BFARQ9NZS9 450 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 TRHDEQ9UKU6 1024 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 NLRC5Q86WI3 1866 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 ZCWPW2A0A1B0GU75 182 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 ERI2A8K979 691 aaKnown RBP14.9□□□□□ -0.02
TPM3-206ENST00000330188 CAPN14A8MX76 684 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 GYG2O15488 501 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 USP1O94782 785 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 CYBAP13498 195 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 NFKB1P19838 968 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 SERPINB6P35237 376 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 BRCC3P46736 316 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms