RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 OR6K2Q8NGY2 324 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 PIP4K2CQ8TBX8 421 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 NKD2Q969F2 451 aaPredicted RBP16.4■□□□□ 0.22
SYNM-201ENST00000328642 TM6SF2Q9BZW4 377 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 CHRAC1Q9NRG0 131 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 DONSONQ9NYP3 566 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 ECM29Q5VYK3 1845 aa16.4■□□□□ 0.22
SYNM-201ENST00000328642 A0A1W2PQH9 124 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 SNX2O60749 519 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 LRIG2O94898 1065 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 CPA3P15088 417 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 OR1D2P34982 312 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 RECQLP46063 649 aaPredicted RBP16.39■□□□□ 0.21
SYNM-201ENST00000328642 CDH18Q13634 790 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 DBN1Q16643 649 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 RFWD3Q6PCD5 774 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 SPATA24Q86W54 205 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 ST13P5Q8NFI4 369 aaPredicted RBP16.39■□□□□ 0.21
SYNM-201ENST00000328642 GPR63Q9BZJ6 419 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 PIGVQ9NUD9 493 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 DTLQ9NZJ0 730 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 IGKV6D-21A0A0A0MT36 114 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 PMM2O15305 246 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 RAMP2O60895 175 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 HOXA11P31270 313 aaPredicted RBP16.39■□□□□ 0.21
SYNM-201ENST00000328642 RFWD2Q8NHY2 731 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 RSPH1Q8WYR4 309 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 MCRS1Q96EZ8 462 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 APOL5Q9BWW9 433 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 ACSS3Q9H6R3 686 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 ZNF395Q9H8N7 513 aaPredicted RBP16.39■□□□□ 0.21
SYNM-201ENST00000328642 VPS28Q9UK41 221 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 V9GYQ6 96 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.39■□□□□ 0.21
SYNM-201ENST00000328642 PAGE1O75459 146 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 ANXA9O76027 345 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 ECHS1P30084 290 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 PTPN7P35236 360 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 GMPRP36959 345 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 CD86P42081 329 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 ZNF252P-AS1Q0IIN9 211 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 BST1Q10588 318 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 ZNF177Q13360 481 aaPredicted RBP16.39■□□□□ 0.21
SYNM-201ENST00000328642 TUSC3Q13454 348 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 RASA2Q15283 850 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 MARK4Q96L34 752 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 ZNF670Q9BS34 389 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 CDH9Q9ULB4 789 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 NRAPQ86VF7 1730 aa16.39■□□□□ 0.21
SYNM-201ENST00000328642 KPNA6O60684 536 aa16.38■□□□□ 0.21
SYNM-201ENST00000328642 F2P00734 622 aa16.38■□□□□ 0.21
SYNM-201ENST00000328642 BTG3Q14201 252 aaPredicted RBP16.38■□□□□ 0.21
SYNM-201ENST00000328642 TMEM209Q96SK2 561 aa16.38■□□□□ 0.21
SYNM-201ENST00000328642 CYP2S1Q96SQ9 504 aa16.38■□□□□ 0.21
SYNM-201ENST00000328642 CCNB1P14635 433 aa16.38■□□□□ 0.21
SYNM-201ENST00000328642 NQO1P15559 274 aaKnown RBP16.38■□□□□ 0.21
SYNM-201ENST00000328642 INHBEP58166 350 aa16.38■□□□□ 0.21
SYNM-201ENST00000328642 TAF10Q12962 218 aa16.38■□□□□ 0.21
SYNM-201ENST00000328642 SLC26A9Q7LBE3 791 aa16.38■□□□□ 0.21
SYNM-201ENST00000328642 CAPNS2Q96L46 248 aa16.38■□□□□ 0.21
SYNM-201ENST00000328642 TRIM62Q9BVG3 475 aa16.38■□□□□ 0.21
SYNM-201ENST00000328642 FAM50BQ9Y247 325 aa16.38■□□□□ 0.21
SYNM-201ENST00000328642 F8W810 466 aa16.38■□□□□ 0.21
SYNM-201ENST00000328642 SLC5A3P53794 718 aa16.38■□□□□ 0.21
SYNM-201ENST00000328642 NAGLUP54802 743 aa16.38■□□□□ 0.21
SYNM-201ENST00000328642 POLD3Q15054 466 aaPredicted RBP16.38■□□□□ 0.21
SYNM-201ENST00000328642 CLEC20AQ6ZU45 233 aa16.38■□□□□ 0.21
SYNM-201ENST00000328642 DQX1Q8TE96 717 aaKnown RBP16.38■□□□□ 0.21
SYNM-201ENST00000328642 EBNA1BP2Q99848 306 aaKnown RBP16.38■□□□□ 0.21
SYNM-201ENST00000328642 CINPQ9BW66 212 aaPredicted RBP16.38■□□□□ 0.21
SYNM-201ENST00000328642 CDY1Q9Y6F8 540 aa16.38■□□□□ 0.21
SYNM-201ENST00000328642 S100BP04271 92 aaPredicted RBP16.37■□□□□ 0.21
SYNM-201ENST00000328642 GATMP50440 423 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 KPNA2P52292 529 aaKnown RBP16.37■□□□□ 0.21
SYNM-201ENST00000328642 DLG2Q15700 870 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 TAC4Q86UU9 113 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 GANCQ8TET4 914 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.37■□□□□ 0.21
SYNM-201ENST00000328642 WDR70Q9NW82 654 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 MIOSQ9NXC5 875 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 ZBTB42B2RXF5 422 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 MYL4P12829 197 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 NR2C2P49116 596 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 GPR15P49685 360 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 BFSP2Q13515 415 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 POM121L1PQ3SYA9 428 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 FRMD8P1Q9BZ68 369 aaPredicted RBP16.37■□□□□ 0.21
SYNM-201ENST00000328642 GPAMQ9HCL2 828 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 ZNF358Q9NW07 568 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 MID2Q9UJV3 735 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 GRIN2DO15399 1336 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.37■□□□□ 0.21
SYNM-201ENST00000328642 DNAJC25-GNG10A0A024R161 153 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 FCHO1O14526 889 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 SEPT4O43236 478 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 RHOBTB1O94844 696 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 GP5P40197 560 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 HADHAP40939 763 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 CHRNA4P43681 627 aa16.37■□□□□ 0.21
SYNM-201ENST00000328642 PURAQ00577 322 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms