RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 SIK2Q9H0K1 926 aa19.33■□□□□ 0.69
EXOSC3-201ENST00000327304 PABPC3Q9H361 631 aaKnown RBP19.33■□□□□ 0.69
EXOSC3-201ENST00000327304 PCDH9Q9HC56 1237 aa19.33■□□□□ 0.69
EXOSC3-201ENST00000327304 ANAPC5Q9UJX4 755 aa19.33■□□□□ 0.69
EXOSC3-201ENST00000327304 CLUHO75153 1309 aa19.33■□□□□ 0.68
EXOSC3-201ENST00000327304 KLKB1P03952 638 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 ITGA8P53708 1063 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 SEMA3BQ13214 749 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 NOMO1Q15155 1222 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 ANKRD20A8PQ5CZ79 823 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 SLC9A4Q6AI14 798 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 ATP6V0D2Q8N8Y2 350 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 MSLNLQ96KJ4 702 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 BTN2A3PQ96KV6 586 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 FOXP3Q9BZS1 431 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 OSBPL2Q9H1P3 480 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 PRDM16Q9HAZ2 1276 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 VPS18Q9P253 973 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 CCL26Q9Y258 94 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 HS3ST4Q9Y661 456 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 NFS1Q9Y697 457 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 HELZP42694 1942 aaKnown RBP19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 SCAMP3O14828 347 aaKnown RBP19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 MCF2LO15068 1137 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 PRAMEF12O95522 483 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 CORO1AP31146 461 aaKnown RBP19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 AVPR1AP37288 418 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 HABP4Q5JVS0 413 aaKnown RBP19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 GET4Q7L5D6 327 aaPredicted RBP19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 UNC45BQ8IWX7 931 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 TTC16Q8NEE8 873 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 P3H4Q92791 437 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 GUCD1Q96NT3 240 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 TMEM121Q9BTD3 319 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 CWC15Q9P013 229 aaKnown RBP19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 RCOR3Q9P2K3 495 aaPredicted RBP19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 SAE1Q9UBE0 346 aaPredicted RBP19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 OR12D3Q9UGF7 316 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 SLC12A6Q9UHW9 1150 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 ARHGAP26Q9UNA1 814 aa19.32■□□□□ 0.68
EXOSC3-201ENST00000327304 SOBPA7XYQ1 873 aa19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 SGK1O00141 431 aa19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 DNALI1O14645 258 aaPredicted RBP19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 APOL1O14791 398 aa19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 CREB3O43889 395 aa19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 GREM1O60565 184 aa19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 NUDT17P0C025 328 aa19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 ZFXP17010 805 aaPredicted RBP19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 GOT1P17174 413 aa19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 HARS2P49590 506 aaKnown RBP19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 EIF3BP55884 814 aaKnown RBP19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 EIF3EP60228 445 aaKnown RBP19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 ARTNQ5T4W7 220 aa19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 IZUMO3Q5VZ72 239 aa19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 NADSYN1Q6IA69 706 aa19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 CES5AQ6NT32 575 aa19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 GPR153Q6NV75 609 aa19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 HIBCHQ6NVY1 386 aaPredicted RBP19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 CEP128Q6ZU80 1094 aa19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 DENND1CQ8IV53 801 aa19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 NPAS3Q8IXF0 933 aa19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 USP13Q92995 863 aaPredicted RBP19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 CSPG4P5Q96PW8 444 aa19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 CFAP97Q9P2B7 532 aa19.31■□□□□ 0.68
EXOSC3-201ENST00000327304 LEFTY2O00292 366 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 PECAM1P16284 738 aaPredicted RBP19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 STIP1P31948 543 aaKnown RBP19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 CCDC85BQ15834 202 aaPredicted RBP19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 MS4A13Q5J8X5 152 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 ATAT1Q5SQI0 421 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 C14orf80Q86SX3 495 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 PQLC3Q8N755 202 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 PLD5Q8N7P1 536 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 PCDH19Q8TAB3 1148 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 GOLGA6L7A0A1B0GV03 622 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 EEF2KO00418 725 aaKnown RBP19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 ACSL4O60488 711 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 LRIG2O94898 1065 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 RBP3P10745 1247 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 VPS41P49754 854 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 MLLT6P55198 1093 aaPredicted RBP19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 P3H1Q32P28 736 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 RAP1GAP2Q684P5 730 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 TRMT10CQ7L0Y3 403 aaKnown RBP19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 PCGF5Q86SE9 256 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 DEFB123Q8N688 67 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 GLIS1Q8NBF1 620 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 RIN3Q8TB24 985 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 SH3RF2Q8TEC5 729 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 RSAD2Q8WXG1 361 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 FGF13Q92913 245 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 ZBTB9Q96C00 473 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 EPB41L4BQ9H329 900 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 ZMYM5Q9UJ78 669 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 AGO1Q9UL18 857 aaKnown RBP19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 NEU3Q9UQ49 428 aa19.3■□□□□ 0.68
EXOSC3-201ENST00000327304 H3BRJ5 948 aa19.29■□□□□ 0.68
EXOSC3-201ENST00000327304 ARL4AP40617 200 aa19.29■□□□□ 0.68
EXOSC3-201ENST00000327304 SLC11A2P49281 568 aa19.29■□□□□ 0.68
EXOSC3-201ENST00000327304 AUHQ13825 339 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms