RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 CREB5Q02930 508 aa17.13■□□□□ 0.33
SSH1-201ENST00000326470 APOFQ13790 326 aa17.13■□□□□ 0.33
SSH1-201ENST00000326470 TNFAIP1Q13829 316 aa17.13■□□□□ 0.33
SSH1-201ENST00000326470 ZNF423Q2M1K9 1284 aa17.13■□□□□ 0.33
SSH1-201ENST00000326470 GOLGA7BQ2TAP0 167 aa17.13■□□□□ 0.33
SSH1-201ENST00000326470 PIGGQ5H8A4 983 aa17.13■□□□□ 0.33
SSH1-201ENST00000326470 BNC2Q6ZN30 1099 aaPredicted RBP17.13■□□□□ 0.33
SSH1-201ENST00000326470 PLD6Q8N2A8 252 aaKnown RBP17.13■□□□□ 0.33
SSH1-201ENST00000326470 C12orf29Q8N999 325 aa17.13■□□□□ 0.33
SSH1-201ENST00000326470 TDRD5Q8NAT2 981 aaKnown RBP17.13■□□□□ 0.33
SSH1-201ENST00000326470 COLGALT1Q8NBJ5 622 aa17.13■□□□□ 0.33
SSH1-201ENST00000326470 DDI1Q8WTU0 396 aa17.13■□□□□ 0.33
SSH1-201ENST00000326470 KBTBD7Q8WVZ9 684 aa17.13■□□□□ 0.33
SSH1-201ENST00000326470 IRGQQ8WZA9 623 aa17.13■□□□□ 0.33
SSH1-201ENST00000326470 ZNF668Q96K58 619 aaPredicted RBP17.13■□□□□ 0.33
SSH1-201ENST00000326470 CSPG4P5Q96PW8 444 aa17.13■□□□□ 0.33
SSH1-201ENST00000326470 NT5C1AQ9BXI3 368 aa17.13■□□□□ 0.33
SSH1-201ENST00000326470 SLC4A5Q9BY07 1137 aa17.13■□□□□ 0.33
SSH1-201ENST00000326470 GMEB1Q9Y692 573 aa17.13■□□□□ 0.33
SSH1-201ENST00000326470 E2F8A0AVK6 867 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 HACD1B0YJ81 288 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 G3V2L1 256 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 CAPNS1P04632 268 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 STAG3L1P0CL83 205 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 ERVK-10P10266 1014 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 ATP6V1B1P15313 513 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 XRCC1P18887 633 aaPredicted RBP17.12■□□□□ 0.33
SSH1-201ENST00000326470 TFE3P19532 575 aaPredicted RBP17.12■□□□□ 0.33
SSH1-201ENST00000326470 HPCAP84074 193 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 NCBP2-AS2Q69YL0 99 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 KLC3Q6P597 504 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 BORAQ6PGQ7 559 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 ISLR2Q6UXK2 745 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 TMEM110Q86TL2 294 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 SNX32Q86XE0 403 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 SCUBE3Q8IX30 993 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 DCLK2Q8N568 766 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 RP9Q8TA86 221 aaKnown RBP17.12■□□□□ 0.33
SSH1-201ENST00000326470 AFG1LQ8WV93 481 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 CERS2Q96G23 380 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 CDRT15Q96T59 188 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 MAGEB5Q9BZ81 275 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 SYBUQ9NX95 663 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 APPL1Q9UKG1 709 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 ADAM28Q9UKQ2 775 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 GNEQ9Y223 722 aaKnown RBP17.12■□□□□ 0.33
SSH1-201ENST00000326470 LCTP09848 1927 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 ZBTB42B2RXF5 422 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 FAM58BPP0C7Q3 252 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 HSPA13P48723 471 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 EXOC8Q8IYI6 725 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 LILRA2Q8N149 483 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 C12orf42Q96LP6 360 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 PRPF18Q99633 342 aaKnown RBP17.12■□□□□ 0.33
SSH1-201ENST00000326470 AS3MTQ9HBK9 375 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 AP4E1Q9UPM8 1137 aa17.12■□□□□ 0.33
SSH1-201ENST00000326470 ARHGAP10A1A4S6 786 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 KPNA7A9QM74 516 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 PAPSS1O43252 624 aaPredicted RBP17.11■□□□□ 0.33
SSH1-201ENST00000326470 TRIM13O60858 407 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 POLBP06746 335 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 SERPINB8P50452 374 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 GK3PQ14409 553 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 SMAD1Q15797 465 aaKnown RBP17.11■□□□□ 0.33
SSH1-201ENST00000326470 PKDCCQ504Y2 493 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 DALRD3Q5D0E6 543 aaKnown RBP17.11■□□□□ 0.33
SSH1-201ENST00000326470 PPM1LQ5SGD2 360 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 IYDQ6PHW0 289 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 TTC39CQ8N584 583 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 SREK1Q8WXA9 508 aaKnown RBP17.11■□□□□ 0.33
SSH1-201ENST00000326470 LZICQ8WZA0 190 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 PGBD4Q96DM1 585 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 KCTD15Q96SI1 283 aaPredicted RBP17.11■□□□□ 0.33
SSH1-201ENST00000326470 PDZD7Q9H5P4 517 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 FAM124BQ9H5Z6 455 aaPredicted RBP17.11■□□□□ 0.33
SSH1-201ENST00000326470 COPS7BQ9H9Q2 264 aaPredicted RBP17.11■□□□□ 0.33
SSH1-201ENST00000326470 TIMMDC1Q9NPL8 285 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 DDX18Q9NVP1 670 aaKnown RBP17.11■□□□□ 0.33
SSH1-201ENST00000326470 PADI4Q9UM07 663 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 SLC22A2O15244 555 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 H2AFYO75367 372 aaKnown RBP17.11■□□□□ 0.33
SSH1-201ENST00000326470 GJB1P08034 283 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 MLH1P40692 756 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 PTPN9P43378 593 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 ATXN1P54253 815 aaKnown RBP17.11■□□□□ 0.33
SSH1-201ENST00000326470 MBTD1Q05BQ5 628 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 SPANXN3Q5MJ09 141 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 BSPRYQ5W0U4 402 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 TTC30AQ86WT1 665 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 DLG3Q92796 817 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 LGMNQ99538 433 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 RBBP8Q99708 897 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 C11orf84Q9BUA3 381 aaPredicted RBP17.11■□□□□ 0.33
SSH1-201ENST00000326470 ILKAPQ9H0C8 392 aaPredicted RBP17.11■□□□□ 0.33
SSH1-201ENST00000326470 ASB7Q9H672 318 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 CHCHD3Q9NX63 227 aaKnown RBP17.11■□□□□ 0.33
SSH1-201ENST00000326470 GGA3Q9NZ52 723 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 MFHAS1Q9Y4C4 1052 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 RPS6KL1Q9Y6S9 549 aa17.11■□□□□ 0.33
SSH1-201ENST00000326470 PRSS51A0A1B0GVH4 220 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms