RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 ENGASEQ8NFI3 743 aa3.42□□□□□ -1.86
CBX3P1-201ENST00000325243 GABPB2Q8TAK5 448 aaPredicted RBP3.42□□□□□ -1.86
CBX3P1-201ENST00000325243 LRRC46Q96FV0 321 aa3.42□□□□□ -1.86
CBX3P1-201ENST00000325243 MAGEB5Q9BZ81 275 aa3.42□□□□□ -1.86
CBX3P1-201ENST00000325243 PRDM11Q9NQV5 511 aa3.42□□□□□ -1.86
CBX3P1-201ENST00000325243 PCDHGB6Q9Y5F9 930 aa3.42□□□□□ -1.86
CBX3P1-201ENST00000325243 A0A0B4J293 547 aa3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 CXorf65A6NEN9 183 aa3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 DHHO43323 396 aa3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 S100BP04271 92 aaPredicted RBP3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 FCGR1AP12314 374 aa3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 FGFR2P21802 821 aa3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 TGM2P21980 687 aa3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 DLX5P56178 289 aa3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 SELENOVP59797 346 aa3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 ZNF543Q08ER8 600 aa3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 PMPCAQ10713 525 aa3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 FNBP1LQ5T0N5 605 aa3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 RAP1GAP2Q684P5 730 aa3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 BEND5Q7L4P6 421 aa3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 FAM177A1Q8N128 213 aaPredicted RBP3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 RNF152Q8N8N0 203 aa3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 ZNF419Q96HQ0 510 aaPredicted RBP3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 WDR77Q9BQA1 342 aaPredicted RBP3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 COLEC11Q9BWP8 271 aa3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 OBP2AQ9NY56 170 aa3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 MYO1AQ9UBC5 1043 aa3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 ZMYND8Q9ULU4 1186 aaPredicted RBP3.41□□□□□ -1.86
CBX3P1-201ENST00000325243 GXYLT2A0PJZ3 443 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 RHPN2P1A8MT19 583 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 GLUD1P00367 558 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 PRSS2P07478 247 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 IDEP14735 1019 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 EGR1P18146 543 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 GABRB3P28472 473 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 GLUD2P49448 558 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 POU5F1BQ06416 359 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 MRGPRG-AS1Q2M3A8 158 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 P3H1Q32P28 736 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 ZNF672Q499Z4 452 aaPredicted RBP3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 DNTTIP2Q5QJE6 756 aaKnown RBP3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 OTUD1Q5VV17 481 aaPredicted RBP3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 ADGRF3Q8IZF5 1079 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 CCDC150Q8NCX0 1101 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 NPIPB3Q92617 1050 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 SNX27Q96L92 541 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 EIF3CQ99613 913 aaKnown RBP3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 APOL5Q9BWW9 433 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 C1QTNF4Q9BXJ3 329 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 POLDIP3Q9BY77 421 aaKnown RBP3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 PCDHAC1Q9H158 963 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 KCNK9Q9NPC2 374 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 TCEAL9Q9UHQ7 104 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 CORO2BQ9UQ03 480 aa3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 UBE2J1Q9Y385 318 aaPredicted RBP3.4□□□□□ -1.87
CBX3P1-201ENST00000325243 A0A1W2PPC4 97 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 DENND3A2RUS2 1198 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 VIPP01282 170 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 TSHRP16473 764 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 ZNF12P17014 697 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 ITGB8P26012 769 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 PIK3CBP42338 1070 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 PMS2P54278 862 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 SEC61A1P61619 476 aaKnown RBP3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 SHC2P98077 582 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 CBFBQ13951 182 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 KLHDC7AQ5VTJ3 777 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 DCAF12L2Q5VW00 463 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 Q6ZSV7 163 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 CREB3L2Q70SY1 520 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 KRT27Q7Z3Y8 459 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 MUC20Q8N307 709 aaPredicted RBP3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 CLIP4Q8N3C7 705 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 SRFBP1Q8NEF9 429 aaKnown RBP3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 JDP2Q8WYK2 163 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 GRAMD1AQ96CP6 724 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 GDF15Q99988 308 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 PAAF1Q9BRP4 392 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 EIF2AQ9BY44 585 aaKnown RBP3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 SPRY4Q9C004 299 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 TXNRD2Q9NNW7 524 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 DDX21Q9NR30 783 aaKnown RBP eCLIP3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 PCDHB7Q9Y5E2 793 aa3.39□□□□□ -1.87
CBX3P1-201ENST00000325243 PLSCR5A0PG75 271 aa3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 POM121BA6NF01 834 aa3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 NPC1O15118 1278 aa3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 SLC16A5O15375 505 aa3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 PECAM1P16284 738 aaPredicted RBP3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 CASP5P51878 434 aa3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 DDR1Q08345 913 aa3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 DSC1Q08554 894 aa3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 NSUN2Q08J23 767 aaKnown RBP eCLIP3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 GALNT3Q14435 633 aa3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 KRT71Q3SY84 523 aa3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 ARHGAP15Q53QZ3 475 aa3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 MSANTD2Q6P1R3 559 aa3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 KDM1BQ8NB78 822 aa3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 TTC8Q8TAM2 541 aa3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 IP6K1Q92551 441 aa3.38□□□□□ -1.87
CBX3P1-201ENST00000325243 TTC17Q96AE7 1141 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms