RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ASAH2Q9NR71 780 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 SAE1Q9UBE0 346 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-202ENST00000324340 SLC12A6Q9UHW9 1150 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 XPO7Q9UIA9 1087 aaKnown RBP13.13□□□□□ -0.31
DDX39A-202ENST00000324340 TPX2Q9ULW0 747 aaKnown RBP13.13□□□□□ -0.31
DDX39A-202ENST00000324340 CLUHO75153 1309 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 IGLV3-10A0A075B6K4 115 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 PER2O15055 1255 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 RFPL2O75678 378 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 LUC7L3O95232 432 aaKnown RBP13.12□□□□□ -0.31
DDX39A-202ENST00000324340 ECEL1O95672 775 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 ERCC2P18074 760 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 HSPA9P38646 679 aaKnown RBP13.12□□□□□ -0.31
DDX39A-202ENST00000324340 DRG2P55039 364 aaKnown RBP13.12□□□□□ -0.31
DDX39A-202ENST00000324340 MRPS25P82663 173 aaKnown RBP13.12□□□□□ -0.31
DDX39A-202ENST00000324340 RBBP5Q15291 538 aaKnown RBP13.12□□□□□ -0.31
DDX39A-202ENST00000324340 MS4A13Q5J8X5 152 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 NPNTQ6UXI9 565 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 CACNA2D3Q8IZS8 1091 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 MRPS31Q92665 395 aaKnown RBP13.12□□□□□ -0.31
DDX39A-202ENST00000324340 HAUS1Q96CS2 278 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 MRPL38Q96DV4 380 aaKnown RBP13.12□□□□□ -0.31
DDX39A-202ENST00000324340 ZFRQ96KR1 1074 aaKnown RBP13.12□□□□□ -0.31
DDX39A-202ENST00000324340 OLFM3Q96PB7 478 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 PRMT1Q99873 361 aaKnown RBP13.12□□□□□ -0.31
DDX39A-202ENST00000324340 FAM118BQ9BPY3 351 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 CORO1BQ9BR76 489 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 PRKD2Q9BZL6 878 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 NACA2Q9H009 215 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 RAB17Q9H0T7 212 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 TLE6Q9H808 572 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 ETNK2Q9NVF9 386 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 DNMT3BQ9UBC3 853 aaKnown RBP13.12□□□□□ -0.31
DDX39A-202ENST00000324340 PPARGC1AQ9UBK2 798 aaKnown RBP13.12□□□□□ -0.31
DDX39A-202ENST00000324340 SNX10Q9Y5X0 201 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 RAD54BQ9Y620 910 aa13.12□□□□□ -0.31
DDX39A-202ENST00000324340 WASH4PA8MWX3 477 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 E9PAM4 449 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 FGF10O15520 208 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-202ENST00000324340 XYLBO75191 536 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 STC2O76061 302 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 GAS8O95995 478 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 PAX7P23759 505 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 DDX6P26196 483 aaKnown RBP eCLIP13.11□□□□□ -0.31
DDX39A-202ENST00000324340 EPHB2P29323 1055 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 KCNQ1P51787 676 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 EIF3EP60228 445 aaKnown RBP13.11□□□□□ -0.31
DDX39A-202ENST00000324340 SLC7A9P82251 487 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 GUCY2DQ02846 1103 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 GBE1Q04446 702 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 SLC10A2Q12908 348 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-202ENST00000324340 IFT88Q13099 833 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 PTK6Q13882 451 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 C5orf22Q49AR2 442 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 DUPD1Q68J44 220 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 TXNDC8Q6A555 127 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 C1orf228Q6PIY5 440 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 BZW1Q7L1Q6 419 aaKnown RBP13.11□□□□□ -0.31
DDX39A-202ENST00000324340 ALLCQ8N6M5 410 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 ZNF483Q8TF39 744 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-202ENST00000324340 ZNF707Q96C28 371 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-202ENST00000324340 TBC1D31Q96DN5 1066 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 SLC22A12Q96S37 553 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 ERP44Q9BS26 406 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 SIK2Q9H0K1 926 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 CNOT10Q9H9A5 744 aaKnown RBP13.11□□□□□ -0.31
DDX39A-202ENST00000324340 TMBIM4Q9HC24 238 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 HCFC1R1Q9NWW0 138 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 ETAA1Q9NY74 926 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 DTLQ9NZJ0 730 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 STOML2Q9UJZ1 356 aa13.11□□□□□ -0.31
DDX39A-202ENST00000324340 CORO1CQ9ULV4 474 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-202ENST00000324340 UTP11Q9Y3A2 253 aaKnown RBP13.11□□□□□ -0.31
DDX39A-202ENST00000324340 A0A1W2PRU2 124 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 BCLAF3A2AJT9 711 aaKnown RBP13.1□□□□□ -0.31
DDX39A-202ENST00000324340 ZSCAN5CA6NGD5 496 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-202ENST00000324340 DRGXA6NNA5 263 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 MCF2LO15068 1137 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 DAPK3O43293 454 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 MFSD11O43934 449 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 ACSL4O60488 711 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 MOSPD3O75425 235 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 LATS1O95835 1130 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 MOCS2O96007 188 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-202ENST00000324340 RHOP08100 348 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 HMBSP08397 361 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 RBP3P10745 1247 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 MBL2P11226 248 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-202ENST00000324340 MYL4P12829 197 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 HDCP19113 662 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 CCR2P41597 374 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 NRIP1P48552 1158 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 HARS2P49590 506 aaKnown RBP13.1□□□□□ -0.31
DDX39A-202ENST00000324340 CYP4F8P98187 520 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 AUHQ13825 339 aaKnown RBP13.1□□□□□ -0.31
DDX39A-202ENST00000324340 PDCD2Q16342 344 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-202ENST00000324340 PRSS36Q5K4E3 855 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 NADSYN1Q6IA69 706 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 TMEM184AQ6ZMB5 413 aa13.1□□□□□ -0.31
DDX39A-202ENST00000324340 PDZD4Q76G19 769 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms