RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 TMEM176AQ96HP8 235 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 CDHR1Q96JP9 859 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 SLC4A5Q9BY07 1137 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 SNX15Q9NRS6 342 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 PADI4Q9UM07 663 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 MSCO60682 206 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 CCDC130P13994 396 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 GARSP41250 739 aaKnown RBP18.3■□□□□ 0.52
PRKCB-202ENST00000321728 RGS7P49802 495 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 SEMA5AQ13591 1074 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 RP9Q8TA86 221 aaKnown RBP18.3■□□□□ 0.52
PRKCB-202ENST00000321728 FNDC8Q8TC99 324 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 PPP1R14BQ96C90 147 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 MOCOSQ96EN8 888 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 KLHL32Q96NJ5 620 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 WDR41Q9HAD4 459 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 ZNF711Q9Y462 761 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 SP2Q02086 613 aa18.29■□□□□ 0.52
PRKCB-202ENST00000321728 TMEM132AQ24JP5 1023 aa18.29■□□□□ 0.52
PRKCB-202ENST00000321728 FAM156AQ8NDB6 213 aa18.29■□□□□ 0.52
PRKCB-202ENST00000321728 ZSCAN18Q8TBC5 510 aaPredicted RBP18.29■□□□□ 0.52
PRKCB-202ENST00000321728 SREK1Q8WXA9 508 aaKnown RBP18.29■□□□□ 0.52
PRKCB-202ENST00000321728 DLG3Q92796 817 aa18.29■□□□□ 0.52
PRKCB-202ENST00000321728 KCNN1Q92952 543 aa18.29■□□□□ 0.52
PRKCB-202ENST00000321728 ACO2Q99798 780 aaKnown RBP18.29■□□□□ 0.52
PRKCB-202ENST00000321728 SEMA6AQ9H2E6 1030 aa18.29■□□□□ 0.52
PRKCB-202ENST00000321728 CAAP1Q9H8G2 361 aa18.29■□□□□ 0.52
PRKCB-202ENST00000321728 ARHGEF38Q9NXL2 777 aa18.29■□□□□ 0.52
PRKCB-202ENST00000321728 COL4A5P29400 1685 aa18.29■□□□□ 0.52
PRKCB-202ENST00000321728 PRSS51A0A1B0GVH4 220 aa18.29■□□□□ 0.52
PRKCB-202ENST00000321728 ONECUT3O60422 494 aaPredicted RBP18.29■□□□□ 0.52
PRKCB-202ENST00000321728 RNASEH2AO75792 299 aaKnown RBP18.29■□□□□ 0.52
PRKCB-202ENST00000321728 F7P08709 466 aaPredicted RBP18.29■□□□□ 0.52
PRKCB-202ENST00000321728 ZNF23P17027 643 aa18.29■□□□□ 0.52
PRKCB-202ENST00000321728 PTPN1P18031 435 aaKnown RBP18.29■□□□□ 0.52
PRKCB-202ENST00000321728 PGAM1P18669 254 aa18.29■□□□□ 0.52
PRKCB-202ENST00000321728 MLH1P40692 756 aa18.29■□□□□ 0.52
PRKCB-202ENST00000321728 NXNQ6DKJ4 435 aa18.29■□□□□ 0.52
PRKCB-202ENST00000321728 SNRNP48Q6IEG0 339 aaKnown RBP18.29■□□□□ 0.52
PRKCB-202ENST00000321728 TMA16Q96EY4 203 aaKnown RBP18.29■□□□□ 0.52
PRKCB-202ENST00000321728 ZNF512Q96ME7 567 aaPredicted RBP18.29■□□□□ 0.52
PRKCB-202ENST00000321728 SLC2A11Q9BYW1 496 aa18.29■□□□□ 0.52
PRKCB-202ENST00000321728 PDGFDQ9GZP0 370 aaPredicted RBP18.29■□□□□ 0.52
PRKCB-202ENST00000321728 EPS15L1Q9UBC2 864 aa18.29■□□□□ 0.52
PRKCB-202ENST00000321728 BLOC1S6Q9UL45 172 aa18.29■□□□□ 0.52
PRKCB-202ENST00000321728 MAFBQ9Y5Q3 323 aaPredicted RBP18.29■□□□□ 0.52
PRKCB-202ENST00000321728 ARHGEF37A1IGU5 675 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 P4HA1P13674 534 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 MPSTP25325 297 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 LSM12Q3MHD2 195 aaKnown RBP18.28■□□□□ 0.52
PRKCB-202ENST00000321728 STYK1Q6J9G0 422 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 DCLK2Q8N568 766 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 CNKSR2Q8WXI2 1034 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 ZNF670Q9BS34 389 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 BCO2Q9BYV7 579 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 INO80BQ9C086 356 aaPredicted RBP18.28■□□□□ 0.52
PRKCB-202ENST00000321728 ILKAPQ9H0C8 392 aaPredicted RBP18.28■□□□□ 0.52
PRKCB-202ENST00000321728 VPS33BQ9H267 617 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 RRN3Q9NYV6 651 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 WNT10BO00744 389 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 SUPT3HO75486 399 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 CHRNGP07510 517 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 SDC4P31431 198 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 GP5P40197 560 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 STT3AP46977 705 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 CDK9P50750 372 aaKnown RBP18.28■□□□□ 0.52
PRKCB-202ENST00000321728 POTEHQ6S545 545 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 PGAM4Q8N0Y7 254 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 GRIN3AQ8TCU5 1115 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 RNF11Q9Y3C5 154 aa18.28■□□□□ 0.52
PRKCB-202ENST00000321728 KPNA7A9QM74 516 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 VWA5AO00534 786 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 TRIM13O60858 407 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 BCAS2O75934 225 aaPredicted RBP18.27■□□□□ 0.52
PRKCB-202ENST00000321728 PRKCBP05771 671 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 DPP6P42658 865 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 KRT80Q6KB66 452 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 TMEM102Q8N9M5 508 aaPredicted RBP18.27■□□□□ 0.52
PRKCB-202ENST00000321728 RIN3Q8TB24 985 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 CNDP1Q96KN2 507 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 MARK4Q96L34 752 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 NUF2Q9BZD4 464 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 DHX35Q9H5Z1 703 aaKnown RBP18.27■□□□□ 0.52
PRKCB-202ENST00000321728 MTMR10Q9NXD2 777 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 PPP1R1BQ9UD71 204 aaPredicted RBP18.27■□□□□ 0.52
PRKCB-202ENST00000321728 SH3GLB1Q9Y371 365 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 SPATA31C2B4DYI2 1134 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 GPR25O00155 361 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 CILPO75339 1184 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 CSPG5O95196 566 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 NUMBP49757 651 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 EFNA5P52803 228 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 CREB5Q02930 508 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 CBX3Q13185 183 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 MGAT5BQ3V5L5 792 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 IL23RQ5VWK5 629 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 TMEM198Q66K66 360 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 SEL1L3Q68CR1 1132 aa18.27■□□□□ 0.52
PRKCB-202ENST00000321728 PTAR1Q7Z6K3 402 aaPredicted RBP18.27■□□□□ 0.52
PRKCB-202ENST00000321728 CHERPQ8IWX8 916 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms