RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 NOP53Q9NZM5 478 aaKnown RBP21.13■□□□□ 0.97
TTC39C-202ENST00000317571 RPS6KL1Q9Y6S9 549 aa21.13■□□□□ 0.97
TTC39C-202ENST00000317571 WFS1O76024 890 aa21.13■□□□□ 0.97
TTC39C-202ENST00000317571 POMCP01189 267 aa21.13■□□□□ 0.97
TTC39C-202ENST00000317571 KITP10721 976 aa21.13■□□□□ 0.97
TTC39C-202ENST00000317571 AIF1P55008 147 aa21.13■□□□□ 0.97
TTC39C-202ENST00000317571 N4BP2L1Q5TBK1 243 aaPredicted RBP21.13■□□□□ 0.97
TTC39C-202ENST00000317571 RFWD3Q6PCD5 774 aa21.13■□□□□ 0.97
TTC39C-202ENST00000317571 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.13■□□□□ 0.97
TTC39C-202ENST00000317571 ZSCAN18Q8TBC5 510 aaPredicted RBP21.13■□□□□ 0.97
TTC39C-202ENST00000317571 SOCS4Q8WXH5 440 aa21.13■□□□□ 0.97
TTC39C-202ENST00000317571 ARHGAP39Q9C0H5 1083 aa21.13■□□□□ 0.97
TTC39C-202ENST00000317571 TKTL2Q9H0I9 626 aa21.13■□□□□ 0.97
TTC39C-202ENST00000317571 LRIG2O94898 1065 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 CYBAP13498 195 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 BDNFP23560 247 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 CNTFP26441 200 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 CD52P31358 61 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 CXCR3P49682 368 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 RPL10AP62906 217 aaKnown RBP21.12■□□□□ 0.97
TTC39C-202ENST00000317571 TRIM32Q13049 653 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 LRRTM3Q86VH5 581 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 OR10T2Q8NGX3 314 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 CERS2Q96G23 380 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 PKMYT1Q99640 499 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 NEU3Q9UQ49 428 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 GIT1Q9Y2X7 761 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 NLRC5Q86WI3 1866 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 E2F8A0AVK6 867 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 MANSC4A6NHS7 340 aaPredicted RBP21.12■□□□□ 0.97
TTC39C-202ENST00000317571 ITM2AO43736 263 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 LYPLA1O75608 230 aaPredicted RBP21.12■□□□□ 0.97
TTC39C-202ENST00000317571 AP2A1O95782 977 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 HCAR3P49019 387 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 MBLAC2Q68D91 279 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 RINLQ6ZS11 566 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 MRPL10Q7Z7H8 261 aaKnown RBP21.12■□□□□ 0.97
TTC39C-202ENST00000317571 RASSF3Q86WH2 238 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 TREML1Q86YW5 311 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 TRIB2Q92519 343 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 AZIN2Q96A70 460 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 DENND2DQ9H6A0 471 aaPredicted RBP21.12■□□□□ 0.97
TTC39C-202ENST00000317571 CHST12Q9NRB3 414 aa21.12■□□□□ 0.97
TTC39C-202ENST00000317571 HBS1LQ9Y450 684 aaKnown RBP21.12■□□□□ 0.97
TTC39C-202ENST00000317571 PTPRDP23468 1912 aa21.11■□□□□ 0.97
TTC39C-202ENST00000317571 HTTP42858 3142 aa21.11■□□□□ 0.97
TTC39C-202ENST00000317571 TDRD15B5MCY1 1934 aaKnown RBP21.11■□□□□ 0.97
TTC39C-202ENST00000317571 ITGB1P05556 798 aa21.11■□□□□ 0.97
TTC39C-202ENST00000317571 FGF3P11487 239 aaPredicted RBP21.11■□□□□ 0.97
TTC39C-202ENST00000317571 PGFP49763 221 aa21.11■□□□□ 0.97
TTC39C-202ENST00000317571 CLNS1AP54105 237 aaKnown RBP21.11■□□□□ 0.97
TTC39C-202ENST00000317571 ZBTB16Q05516 673 aa21.11■□□□□ 0.97
TTC39C-202ENST00000317571 GALNT2Q10471 571 aa21.11■□□□□ 0.97
TTC39C-202ENST00000317571 CRHR2Q13324 411 aa21.11■□□□□ 0.97
TTC39C-202ENST00000317571 FASTKD1Q53R41 847 aaKnown RBP21.11■□□□□ 0.97
TTC39C-202ENST00000317571 ATG16L1Q676U5 607 aa21.11■□□□□ 0.97
TTC39C-202ENST00000317571 FAM171BQ6P995 826 aa21.11■□□□□ 0.97
TTC39C-202ENST00000317571 TTC8Q8TAM2 541 aa21.11■□□□□ 0.97
TTC39C-202ENST00000317571 CELF6Q96J87 481 aaKnown RBP21.11■□□□□ 0.97
TTC39C-202ENST00000317571 APOL2Q9BQE5 337 aa21.11■□□□□ 0.97
TTC39C-202ENST00000317571 ZNF358Q9NW07 568 aa21.11■□□□□ 0.97
TTC39C-202ENST00000317571 KCNK4Q9NYG8 393 aa21.11■□□□□ 0.97
TTC39C-202ENST00000317571 OR12D3Q9UGF7 316 aa21.11■□□□□ 0.97
TTC39C-202ENST00000317571 PADI3Q9ULW8 664 aa21.11■□□□□ 0.97
TTC39C-202ENST00000317571 MAGED2Q9UNF1 606 aaPredicted RBP21.11■□□□□ 0.97
TTC39C-202ENST00000317571 ZCWPW2A0A1B0GU75 182 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 BIRC5O15392 142 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 DIAPH2O60879 1101 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 NFKB1P19838 968 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 ARRB2P32121 409 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 CMC1Q7Z7K0 106 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 CDKL2Q92772 493 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 HDAC11Q96DB2 347 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 NSL1Q96IY1 281 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 WDCPQ9H6R7 721 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 CASS4Q9NQ75 786 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 PLIN3O60664 434 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 KCNA4P22459 653 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 GARSP41250 739 aaKnown RBP21.1■□□□□ 0.97
TTC39C-202ENST00000317571 ABCG1P45844 678 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 PCLAFQ15004 111 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 CERCAMQ5T4B2 595 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 PM20D1Q6GTS8 502 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 CCNJLQ8IV13 435 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 TRIM42Q8IWZ5 723 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 KIRREL3Q8IZU9 778 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 SCAMP5Q8TAC9 235 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 ZNF669Q96BR6 464 aaPredicted RBP21.1■□□□□ 0.97
TTC39C-202ENST00000317571 ZNF419Q96HQ0 510 aaPredicted RBP21.1■□□□□ 0.97
TTC39C-202ENST00000317571 RSRC1Q96IZ7 334 aaKnown RBP21.1■□□□□ 0.97
TTC39C-202ENST00000317571 AGAP2Q99490 1192 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 EBF4Q9BQW3 602 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 GBA3Q9H227 469 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 ZFATQ9P243 1243 aa21.1■□□□□ 0.97
TTC39C-202ENST00000317571 MRPL42Q9Y6G3 142 aaKnown RBP21.1■□□□□ 0.97
TTC39C-202ENST00000317571 RASSF2P50749 326 aa21.09■□□□□ 0.97
TTC39C-202ENST00000317571 AQP5P55064 265 aa21.09■□□□□ 0.97
TTC39C-202ENST00000317571 INTS6LQ5JSJ4 861 aaKnown RBP21.09■□□□□ 0.97
TTC39C-202ENST00000317571 ARTNQ5T4W7 220 aa21.09■□□□□ 0.97
TTC39C-202ENST00000317571 KYAT3Q6YP21 454 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms