RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 MRPS21P82921 87 aaKnown RBP12.42□□□□□ -0.42
SCFD1-201ENST00000311943 PITRM1Q5JRX3 1037 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 KCNT1Q5JUK3 1230 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 LINGO4Q6UY18 593 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 MAMSTRQ6ZN01 415 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 TP53INP2Q8IXH6 220 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 DRC7Q8IY82 874 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 SUMF1Q8NBK3 374 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 SPC24Q8NBT2 197 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 MSANTD4Q8NCY6 345 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 TSTD1Q8NFU3 115 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 OR7D4Q8NG98 312 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 FIBINQ8TAL6 211 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 SYN2Q92777 582 aaPredicted RBP12.42□□□□□ -0.42
SCFD1-201ENST00000311943 TRIM62Q9BVG3 475 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 SMOC1Q9H4F8 434 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 ZNF212Q9UDV6 495 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 EP300Q09472 2414 aaPredicted RBP12.41□□□□□ -0.42
SCFD1-201ENST00000311943 A0A0U1RQJ8 604 aa12.41□□□□□ -0.42
SCFD1-201ENST00000311943 LILRB5O75023 590 aa12.41□□□□□ -0.42
SCFD1-201ENST00000311943 NDUFV2P19404 249 aa12.41□□□□□ -0.42
SCFD1-201ENST00000311943 PSMA2P25787 234 aa12.41□□□□□ -0.42
SCFD1-201ENST00000311943 PTPN9P43378 593 aa12.41□□□□□ -0.42
SCFD1-201ENST00000311943 SMTNL2Q2TAL5 461 aa12.41□□□□□ -0.42
SCFD1-201ENST00000311943 ATP13A4Q4VNC1 1196 aa12.41□□□□□ -0.42
SCFD1-201ENST00000311943 PRR23BQ6ZRT6 265 aa12.41□□□□□ -0.42
SCFD1-201ENST00000311943 ATRIPQ8WXE1 791 aa12.41□□□□□ -0.42
SCFD1-201ENST00000311943 FAM122AQ96E09 287 aa12.41□□□□□ -0.42
SCFD1-201ENST00000311943 NHEJ1Q9H9Q4 299 aaPredicted RBP12.41□□□□□ -0.42
SCFD1-201ENST00000311943 ZSCAN32Q9NX65 697 aa12.41□□□□□ -0.42
SCFD1-201ENST00000311943 THAP10Q9P2Z0 257 aaPredicted RBP12.41□□□□□ -0.42
SCFD1-201ENST00000311943 DNAI1Q9UI46 699 aa12.41□□□□□ -0.42
SCFD1-201ENST00000311943 MFHAS1Q9Y4C4 1052 aa12.41□□□□□ -0.42
SCFD1-201ENST00000311943 OR51B4Q9Y5P0 310 aa12.41□□□□□ -0.42
SCFD1-201ENST00000311943 LRIG2O94898 1065 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 EPHX1P07099 455 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 GZMAP12544 262 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 MAGEA9P43362 315 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 MRE11P49959 708 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 PLEKHG6Q3KR16 790 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 RNF219Q5W0B1 726 aaPredicted RBP12.4□□□□□ -0.42
SCFD1-201ENST00000311943 ARCQ7LC44 396 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 KBTBD6Q86V97 674 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 PGBD3Q8N328 593 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 TMEM245Q9H330 911 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 PARVAQ9NVD7 372 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 OR12D3Q9UGF7 316 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 SLC12A6Q9UHW9 1150 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 AXIN1O15169 862 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 CREB3O43889 395 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 LRCH4O75427 683 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 TPM3P06753 285 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 ACVRL1P37023 503 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 COPAP53621 1224 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 BRMS1LQ5PSV4 323 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 MPP7Q5T2T1 576 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 SMYD5Q6GMV2 418 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 RWDD4Q6NW29 188 aaKnown RBP12.4□□□□□ -0.42
SCFD1-201ENST00000311943 SERPINA13PQ6UXR4 307 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 SND1Q7KZF4 910 aaKnown RBP eCLIP12.4□□□□□ -0.42
SCFD1-201ENST00000311943 STRADAQ7RTN6 431 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.4□□□□□ -0.42
SCFD1-201ENST00000311943 MRGPRX1Q96LB2 322 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 PSMB7Q99436 277 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 GABRG3Q99928 467 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 CNPY3Q9BT09 278 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 NUP85Q9BW27 656 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 KLC2Q9H0B6 622 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 GOLPH3Q9H4A6 298 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 FZD10Q9ULW2 581 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 HYOU1Q9Y4L1 999 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 GON4LQ3T8J9 2241 aa12.4□□□□□ -0.42
SCFD1-201ENST00000311943 NUMA1Q14980 2115 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 RIF1Q5UIP0 2472 aaKnown RBP12.39□□□□□ -0.43
SCFD1-201ENST00000311943 A0A1B0GVM2 712 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 PRR23AA6NEV1 266 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 TCAF2A6NFQ2 919 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 SOWAHDA6NJG2 315 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 DRGXA6NNA5 263 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 AKR1B15C9JRZ8 316 aaPredicted RBP12.39□□□□□ -0.43
SCFD1-201ENST00000311943 PLK4O00444 970 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 ATG13O75143 517 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 PAPSS2O95340 614 aaPredicted RBP12.39□□□□□ -0.43
SCFD1-201ENST00000311943 F9P00740 461 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 SLC2A3P11169 496 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 MIPP30301 263 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 NUBP1P53384 320 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 ZNF528Q3MIS6 628 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 POM121L1PQ3SYA9 428 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 FNDC3BQ53EP0 1204 aaKnown RBP12.39□□□□□ -0.43
SCFD1-201ENST00000311943 MANEALQ5VSG8 457 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 ARMCX6Q7L4S7 300 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 LONP2Q86WA8 852 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 RASSF3Q86WH2 238 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 AHI1Q8N157 1196 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 PRRX2Q99811 253 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 FEM1AQ9BSK4 669 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 SNRNP25Q9BV90 132 aaKnown RBP12.39□□□□□ -0.43
SCFD1-201ENST00000311943 SLC2A11Q9BYW1 496 aa12.39□□□□□ -0.43
SCFD1-201ENST00000311943 KCNH6Q9H252 994 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms