RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 ENO3P13929 434 aaPredicted RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 RPL5P46777 297 aaKnown RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 LAPTM5Q13571 262 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 BTG3Q14201 252 aaPredicted RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 TRIM16LQ309B1 348 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 PAMR1Q6UXH9 720 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 ALLCQ8N6M5 410 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 C12orf50Q8NA57 414 aaPredicted RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 FLCNQ8NFG4 579 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 RAB2BQ8WUD1 216 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 BLZF1Q9H2G9 400 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 CNGB3Q9NQW8 809 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 ARHGEF38Q9NXL2 777 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 NR2E1Q9Y466 385 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 SLC30A1Q9Y6M5 507 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 OCM2P0CE71 109 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 OCMP0CE72 109 aaPredicted RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 NOS2P35228 1153 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 LIN54Q6MZP7 749 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 RGS9BPQ6ZS82 235 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 SPATA2LQ8IUW3 424 aaPredicted RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 DNAJC10Q8IXB1 793 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 ETNPPLQ8TBG4 499 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 RAB6BQ9NRW1 208 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 HAO1Q9UJM8 370 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 VAV3Q9UKW4 847 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 MAP2K7O14733 419 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 CHN1P15882 459 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 HSD17B3P37058 310 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 ALDH7A1P49419 539 aaKnown RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 CTCFP49711 727 aaPredicted RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 ERMARDQ5T6L9 678 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 DENND1BQ6P3S1 775 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 MCOLN3Q8TDD5 553 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 C2orf49Q9BVC5 232 aaPredicted RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.1□□□□□ -1.75
USH2A-201ENST00000307340 AGPAT3Q9NRZ7 376 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 A0A1B0GUL6 1792 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 SPDYE16A6NNV3 312 aaPredicted RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 RCVRNP35243 200 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 BACE1P56817 501 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 SESN2P58004 480 aaPredicted RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 RGS21Q2M5E4 152 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 SPDYE2Q495Y8 402 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 CNTD1Q8N815 330 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 TOR1AIP2Q8NFQ8 470 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 OR56A4Q8NGH8 313 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 NDUFAF1Q9Y375 327 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 GRXCR2A6NFK2 248 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 EPOP01588 193 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 GJC1P36383 396 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 TMEM192Q8IY95 271 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 PIGSQ96S52 555 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 ZNF232Q9UNY5 417 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 RGPD2P0DJD1 1756 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 SCN3AQ9NY46 2000 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 RGSL1A5PLK6 1076 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 PDZK1P1A8MUH7 402 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 EIF3FO00303 357 aaPredicted RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 TMCC2O75069 709 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 UGT2B11O75310 529 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 RGS20O76081 388 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 MYCP01106 439 aaPredicted RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 COILP38432 576 aaPredicted RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 MZT2BQ6NZ67 158 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 RTL3Q8N8U3 475 aaKnown RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 DACH2Q96NX9 599 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 ZNF347Q96SE7 839 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 DESI2Q9BSY9 194 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 ADPRHL2Q9NX46 363 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 ANAPC2Q9UJX6 822 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 MFN2O95140 757 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 MMP13P45452 471 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 CENPAP49450 140 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 PARP15Q460N3 678 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 HES6Q96HZ4 224 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 EBNA1BP2Q99848 306 aaKnown RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 MYLK2Q9H1R3 596 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 KCNMB3Q9NPA1 279 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 COPZ2Q9P299 210 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 CYP2D7A0A087X1C5 515 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 MDM4O15151 490 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 ATP6V1C1P21283 382 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 PSMA1P25786 263 aaKnown RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 LGALS3BPQ08380 585 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 NDUFAF6Q330K2 333 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 VSTM1Q6UX27 236 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 B3GNT6Q6ZMB0 384 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 ANKS1BQ7Z6G8 1248 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 ZNF607Q96SK3 696 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 ELAC2Q9BQ52 826 aaKnown RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 ADA2Q9NZK5 511 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 CPNE7Q9UBL6 633 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 ZBTB21Q9ULJ3 1066 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 AKAP8O43823 692 aaKnown RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 PTPN5P54829 565 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 PKN3Q6P5Z2 889 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 CCDC60Q8IWA6 550 aaPredicted RBP4.09□□□□□ -1.75
USH2A-201ENST00000307340 CCDC185Q8N715 623 aa4.09□□□□□ -1.75
USH2A-201ENST00000307340 FUCA2Q9BTY2 467 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms