RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 CCL15Q16663 113 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 TBCELQ5QJ74 424 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 KIAA1841Q6NSI8 718 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 SLC35B2Q8TB61 432 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 FNIP1Q8TF40 1166 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 RMND5BQ96G75 393 aaPredicted RBP13.56□□□□□ -0.24
DDX54-201ENST00000306014 RBM22Q9NW64 420 aaKnown RBP eCLIP13.56□□□□□ -0.243e-7■■■■■ 28.8
DDX54-201ENST00000306014 VTI1BQ9UEU0 232 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 ZMYND8Q9ULU4 1186 aaPredicted RBP13.56□□□□□ -0.24
DDX54-201ENST00000306014 YDJCA8MPS7 323 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 CRHR1P34998 444 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 RGS2P41220 211 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 CD151P48509 253 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 FOLH1Q04609 750 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 AASDHQ4L235 1098 aaPredicted RBP13.56□□□□□ -0.24
DDX54-201ENST00000306014 PPP1R26Q5T8A7 1209 aaPredicted RBP13.56□□□□□ -0.24
DDX54-201ENST00000306014 ZFRQ96KR1 1074 aaKnown RBP13.56□□□□□ -0.24
DDX54-201ENST00000306014 PIF1Q9H611 641 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 SNX15Q9NRS6 342 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 SYBUQ9NX95 663 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 AFF4Q9UHB7 1163 aaKnown RBP13.56□□□□□ -0.24
DDX54-201ENST00000306014 MRASO14807 208 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 MAGEC1O60732 1142 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 B3GAT3O94766 335 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 RHOBTB1O94844 696 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 PPM1JQ5JR12 505 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 AAGABQ6PD74 315 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 CHSY1Q86X52 802 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 ZC3H15Q8WU90 426 aaKnown RBP13.56□□□□□ -0.24
DDX54-201ENST00000306014 UPF1Q92900 1129 aaKnown RBP eCLIP13.56□□□□□ -0.24
DDX54-201ENST00000306014 RCN3Q96D15 328 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 ACE2Q9BYF1 805 aaPredicted RBP13.56□□□□□ -0.24
DDX54-201ENST00000306014 WDR55Q9H6Y2 383 aaPredicted RBP13.56□□□□□ -0.24
DDX54-201ENST00000306014 CAB39LQ9H9S4 337 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 S100A14Q9HCY8 104 aa13.56□□□□□ -0.24
DDX54-201ENST00000306014 CAPN8A6NHC0 703 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 NCF1BA6NI72 391 aaPredicted RBP13.55□□□□□ -0.24
DDX54-201ENST00000306014 RRN3P2A6NIE6 340 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 NCF1CA8MVU1 366 aaPredicted RBP13.55□□□□□ -0.24
DDX54-201ENST00000306014 NCF1P14598 390 aaPredicted RBP13.55□□□□□ -0.24
DDX54-201ENST00000306014 GRIA4P48058 902 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 GTF2A2P52657 109 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 NAB1Q13506 487 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 PEX6Q13608 980 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 SLC39A4Q6P5W5 647 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 TRMT10BQ6PF06 316 aaKnown RBP13.55□□□□□ -0.24
DDX54-201ENST00000306014 ZNF555Q8NEP9 628 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 NLGN2Q8NFZ4 835 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 DDX1Q92499 740 aaKnown RBP13.55□□□□□ -0.24
DDX54-201ENST00000306014 OMDQ99983 421 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 ELOVL4Q9GZR5 314 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 SLC38A7Q9NVC3 462 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 CD274Q9NZQ7 290 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 CROTQ9UKG9 612 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 MYH3P11055 1940 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 PAPSS1O43252 624 aaPredicted RBP13.55□□□□□ -0.24
DDX54-201ENST00000306014 GPX6P59796 221 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 CATSPERGQ6ZRH7 1159 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 PSTKQ8IV42 348 aaKnown RBP13.55□□□□□ -0.24
DDX54-201ENST00000306014 GPRC5AQ8NFJ5 357 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 C7orf43Q8WVR3 580 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 DHX33Q9H6R0 707 aaKnown RBP13.55□□□□□ -0.24
DDX54-201ENST00000306014 PAIP2BQ9ULR5 123 aaKnown RBP13.55□□□□□ -0.24
DDX54-201ENST00000306014 PPME1Q9Y570 386 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 CLUHO75153 1309 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 RGSL1A5PLK6 1076 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 C16orf96A6NNT2 1141 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 HDAC3O15379 428 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 RBP1P09455 135 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 YBX3P16989 372 aaKnown RBP eCLIP13.55□□□□□ -0.241e-6■■□□□ 12.2
DDX54-201ENST00000306014 IL1R2P27930 398 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 LBRQ14739 615 aaKnown RBP13.55□□□□□ -0.24
DDX54-201ENST00000306014 MSS51Q4VC12 460 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 SLC44A4Q53GD3 710 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 DHFR2Q86XF0 187 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 ZNF333Q96JL9 665 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 TXLNGYQ9BZA5 131 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 COG4Q9H9E3 785 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 PTPRHQ9HD43 1115 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 LAMB4A4D0S4 1761 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 UGT1A9O60656 530 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 SIN3BO75182 1162 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 BAIAP3O94812 1187 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 NPY2RP49146 381 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 NFYCQ13952 458 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 SH3PXD2AQ5TCZ1 1133 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 ZDHHC14Q8IZN3 488 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 SPATA6LQ8N4H0 392 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 NAT8LQ8N9F0 302 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 PPP1R2P1Q96PQ5 205 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 UGT1A7Q9HAW7 530 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 UGT1A10Q9HAW8 530 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 UGT1A8Q9HAW9 530 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 DMAP1Q9NPF5 467 aaPredicted RBP13.55□□□□□ -0.24
DDX54-201ENST00000306014 PCDHGC3Q9UN70 934 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 AP4S1Q9Y587 144 aa13.55□□□□□ -0.24
DDX54-201ENST00000306014 MYH7BA7E2Y1 1941 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 UQCRBP14927 111 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 RALGPS1Q5JS13 557 aa13.54□□□□□ -0.24
DDX54-201ENST00000306014 ANO7Q6IWH7 933 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms