RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 C10orf107Q8IVU9 208 aa13.79□□□□□ -0.2
CTDP1-202ENST00000299543 PPP4R1Q8TF05 950 aa13.79□□□□□ -0.2
CTDP1-202ENST00000299543 FRMD8Q9BZ67 464 aaPredicted RBP13.79□□□□□ -0.2
CTDP1-202ENST00000299543 PNPLA8Q9NP80 782 aa13.79□□□□□ -0.2
CTDP1-202ENST00000299543 TAGLN3Q9UI15 199 aa13.79□□□□□ -0.2
CTDP1-202ENST00000299543 PIN4Q9Y237 131 aaKnown RBP13.79□□□□□ -0.2
CTDP1-202ENST00000299543 M0QYT0 321 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 SFSWAPQ12872 951 aaKnown RBP13.78□□□□□ -0.2
CTDP1-202ENST00000299543 BTG3Q14201 252 aaPredicted RBP13.78□□□□□ -0.2
CTDP1-202ENST00000299543 STILQ15468 1287 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 NCBP2-AS2Q69YL0 99 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 CTU1Q7Z7A3 348 aaKnown RBP13.78□□□□□ -0.2
CTDP1-202ENST00000299543 ANKRD13AQ8IZ07 590 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 GPC2Q8N158 579 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 GSTCDQ8NEC7 633 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 NCSTNQ92542 709 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 P2RY11Q96G91 374 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 PRDM12Q9H4Q4 367 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 PFDN4Q9NQP4 134 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 SYBUQ9NX95 663 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 DOLKQ9UPQ8 538 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 TRIM43BA6NCK2 446 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 MDM4O15151 490 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 KRT72Q14CN4 511 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 MAP7D1Q3KQU3 841 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 RALGPS1Q5JS13 557 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 ULK2Q8IYT8 1036 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 C7orf26Q96N11 449 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 FAM192AQ9GZU8 254 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 VRTNQ9H8Y1 702 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 THAP1Q9NVV9 213 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 SIRPGQ9P1W8 387 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 RGS17Q9UGC6 210 aaPredicted RBP13.78□□□□□ -0.2
CTDP1-202ENST00000299543 PPM1HQ9ULR3 514 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 PPP2R3BQ9Y5P8 575 aa13.78□□□□□ -0.2
CTDP1-202ENST00000299543 TMEM221A6NGB7 291 aa13.77□□□□□ -0.2
CTDP1-202ENST00000299543 FAM159BA6NKW6 160 aa13.77□□□□□ -0.2
CTDP1-202ENST00000299543 GCATO75600 419 aa13.77□□□□□ -0.2
CTDP1-202ENST00000299543 ZFXP17010 805 aaPredicted RBP13.77□□□□□ -0.2
CTDP1-202ENST00000299543 TPH1P17752 444 aa13.77□□□□□ -0.2
CTDP1-202ENST00000299543 PCSK6P29122 969 aa13.77□□□□□ -0.2
CTDP1-202ENST00000299543 CRHR1P34998 444 aa13.77□□□□□ -0.2
CTDP1-202ENST00000299543 SERPINB9P50453 376 aa13.77□□□□□ -0.2
CTDP1-202ENST00000299543 ADARP55265 1226 aaKnown RBP13.77□□□□□ -0.2
CTDP1-202ENST00000299543 BST2Q10589 180 aaKnown RBP13.77□□□□□ -0.2
CTDP1-202ENST00000299543 LPCAT4Q643R3 524 aa13.77□□□□□ -0.2
CTDP1-202ENST00000299543 PACS1Q6VY07 963 aa13.77□□□□□ -0.2
CTDP1-202ENST00000299543 TRIM67Q6ZTA4 783 aa13.77□□□□□ -0.2
CTDP1-202ENST00000299543 OR52K1Q8NGK4 314 aa13.77□□□□□ -0.2
CTDP1-202ENST00000299543 RIN3Q8TB24 985 aa13.77□□□□□ -0.2
CTDP1-202ENST00000299543 SLC26A7Q8TE54 656 aa13.77□□□□□ -0.2
CTDP1-202ENST00000299543 PYDC1Q8WXC3 89 aa13.77□□□□□ -0.2
CTDP1-202ENST00000299543 LRRC4Q9HBW1 653 aa13.77□□□□□ -0.2
CTDP1-202ENST00000299543 MTMR10Q9NXD2 777 aa13.77□□□□□ -0.2
CTDP1-202ENST00000299543 MGAMO43451 1857 aa13.77□□□□□ -0.2
CTDP1-202ENST00000299543 SORBS2O94875 1100 aaKnown RBP13.77□□□□□ -0.21
CTDP1-202ENST00000299543 ALDOAP04075 364 aaKnown RBP13.77□□□□□ -0.21
CTDP1-202ENST00000299543 FBXO47Q5MNV8 452 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 PIGZQ86VD9 579 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 APLFQ8IW19 511 aaPredicted RBP13.77□□□□□ -0.21
CTDP1-202ENST00000299543 MCUQ8NE86 351 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 ZNF669Q96BR6 464 aaPredicted RBP13.77□□□□□ -0.21
CTDP1-202ENST00000299543 LRRC39Q96DD0 335 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 FERMT1Q9BQL6 677 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 UNKQ9C0B0 810 aaKnown RBP13.77□□□□□ -0.21
CTDP1-202ENST00000299543 RNF39Q9H2S5 420 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 CAB39LQ9H9S4 337 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 ARHGEF4Q9NR80 690 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 TMEM216Q9P0N5 145 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 SLC7A8Q9UHI5 535 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 FAF1Q9UNN5 650 aaPredicted RBP13.77□□□□□ -0.21
CTDP1-202ENST00000299543 A0A0A0MRY4 1105 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 TFPTP0C1Z6 253 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 PSMD7P51665 324 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 CDC16Q13042 620 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 DPYSL2Q16555 572 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 EML3Q32P44 896 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 PIWIL2Q8TC59 973 aaKnown RBP13.77□□□□□ -0.21
CTDP1-202ENST00000299543 SPATA13Q96N96 652 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 CORO1BQ9BR76 489 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 TIMM13Q9Y5L4 95 aaPredicted RBP13.77□□□□□ -0.21
CTDP1-202ENST00000299543 COMMD3-BMI1R4GMX3 469 aa13.77□□□□□ -0.21
CTDP1-202ENST00000299543 LCTP09848 1927 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 DNAJC25-GNG10A0A024R161 153 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 SPTLC1O15269 473 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 DYNC1LI2O43237 492 aaPredicted RBP13.76□□□□□ -0.21
CTDP1-202ENST00000299543 TRPA1O75762 1119 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 BCAT1P54687 386 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 DLG2Q15700 870 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 FAM187BQ17R55 369 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 RBM44Q6ZP01 1051 aaKnown RBP13.76□□□□□ -0.21
CTDP1-202ENST00000299543 ZBTB8BQ8NAP8 495 aaPredicted RBP13.76□□□□□ -0.21
CTDP1-202ENST00000299543 ANKRD52Q8NB46 1076 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 LIN28AQ9H9Z2 209 aaKnown RBP13.76□□□□□ -0.21
CTDP1-202ENST00000299543 PARP14Q460N5 1801 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 GOLGA8QA0A0J9YX86 632 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 GOLGA8OA6NCC3 632 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 KPNA7A9QM74 516 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 E9PBE3 544 aa13.76□□□□□ -0.21
CTDP1-202ENST00000299543 GOLGA8NF8WBI6 632 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms