RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CFAP97Q9P2B7 532 aa21.84■■□□□ 1.09
SMCO4-201ENST00000298966 PCDHB9Q9Y5E1 797 aa21.84■■□□□ 1.09
SMCO4-201ENST00000298966 ZNF840PA6NDX5 716 aa21.83■■□□□ 1.09
SMCO4-201ENST00000298966 XPO1O14980 1071 aaKnown RBP21.83■■□□□ 1.09
SMCO4-201ENST00000298966 ATP2C2O75185 946 aa21.83■■□□□ 1.09
SMCO4-201ENST00000298966 ATP1A1P05023 1023 aaKnown RBP21.83■■□□□ 1.09
SMCO4-201ENST00000298966 SLC1A1P43005 524 aa21.83■■□□□ 1.09
SMCO4-201ENST00000298966 PLA2G4AP47712 749 aa21.83■■□□□ 1.09
SMCO4-201ENST00000298966 PSMC1P62191 440 aaKnown RBP21.83■■□□□ 1.09
SMCO4-201ENST00000298966 TRIP6Q15654 476 aaKnown RBP21.83■■□□□ 1.09
SMCO4-201ENST00000298966 WHAMMP3Q1A5X7 153 aa21.83■■□□□ 1.09
SMCO4-201ENST00000298966 PTPN20Q4JDL3 420 aa21.83■■□□□ 1.09
SMCO4-201ENST00000298966 SOWAHCQ53LP3 525 aaPredicted RBP21.83■■□□□ 1.09
SMCO4-201ENST00000298966 DAAM2Q86T65 1068 aa21.83■■□□□ 1.09
SMCO4-201ENST00000298966 TMEM110Q86TL2 294 aa21.83■■□□□ 1.09
SMCO4-201ENST00000298966 DDX42Q86XP3 938 aaKnown RBP eCLIP21.83■■□□□ 1.09
SMCO4-201ENST00000298966 OR2I1PQ8NGU4 316 aa21.83■■□□□ 1.09
SMCO4-201ENST00000298966 SLC2A14Q8TDB8 520 aa21.83■■□□□ 1.09
SMCO4-201ENST00000298966 OSGEPQ9NPF4 335 aa21.83■■□□□ 1.09
SMCO4-201ENST00000298966 DNAAF2Q9NVR5 837 aaKnown RBP21.83■■□□□ 1.09
SMCO4-201ENST00000298966 TBC1D14Q9P2M4 693 aa21.83■■□□□ 1.09
SMCO4-201ENST00000298966 AMFRQ9UKV5 643 aa21.83■■□□□ 1.09
SMCO4-201ENST00000298966 TBC1D3BA6NDS4 549 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 MIF4GDA9UHW6 222 aaKnown RBP21.82■■□□□ 1.08
SMCO4-201ENST00000298966 MYO1FO00160 1098 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 ZBTB24O43167 697 aaPredicted RBP21.82■■□□□ 1.08
SMCO4-201ENST00000298966 BUB1BO60566 1050 aaPredicted RBP21.82■■□□□ 1.08
SMCO4-201ENST00000298966 SLU7O95391 586 aaKnown RBP21.82■■□□□ 1.08
SMCO4-201ENST00000298966 OLFM2O95897 454 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 FAM200BP0CF97 657 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 MAN1A1P33908 653 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 GAD2Q05329 585 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 MAMLD1Q13495 774 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 PREPLQ4J6C6 727 aaPredicted RBP21.82■■□□□ 1.08
SMCO4-201ENST00000298966 MEI1Q5TIA1 1274 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 NUDT18Q6ZVK8 323 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 PEX26Q7Z412 305 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 FUKQ8N0W3 1084 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 UBA3Q8TBC4 463 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 KCNV2Q8TDN2 545 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 FNIP1Q8TF40 1166 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 ADAMTS14Q8WXS8 1223 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 SMARCD1Q96GM5 515 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 SELENOOQ9BVL4 669 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 CCDC86Q9H6F5 360 aaKnown RBP21.82■■□□□ 1.08
SMCO4-201ENST00000298966 CRTAC1Q9NQ79 661 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 HYOU1Q9Y4L1 999 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 SAR1BQ9Y6B6 198 aa21.82■■□□□ 1.08
SMCO4-201ENST00000298966 APC2O95996 2303 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 FREM2Q5SZK8 3169 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 TCRBV5S1A1TA0A578 114 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 SIGLEC16A6NMB1 481 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 CES2O00748 559 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 TRIM66O15016 1216 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 MBL2P11226 248 aaPredicted RBP21.81■■□□□ 1.08
SMCO4-201ENST00000298966 CCDC130P13994 396 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 GABRG2P18507 467 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 PDE4CQ08493 712 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 SLC14A1Q13336 389 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 COL28A1Q2UY09 1125 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 MDH1BQ5I0G3 518 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 LY6G5CQ5SRR4 150 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 BTBD8Q5XKL5 378 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 ZNF513Q8N8E2 541 aaPredicted RBP21.81■■□□□ 1.08
SMCO4-201ENST00000298966 KCTD13Q8WZ19 329 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 CPXM1Q96SM3 734 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 MED10Q9BTT4 135 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 PNPLA8Q9NP80 782 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 CALCOCO1Q9P1Z2 691 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 IP6K2Q9UHH9 426 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 ANAPC7Q9UJX3 599 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 SNX12Q9UMY4 172 aa21.81■■□□□ 1.08
SMCO4-201ENST00000298966 SETXQ7Z333 2677 aaKnown RBP21.8■■□□□ 1.08
SMCO4-201ENST00000298966 SH3BP5O60239 455 aa21.8■■□□□ 1.08
SMCO4-201ENST00000298966 OAS1P00973 400 aaKnown RBP21.8■■□□□ 1.08
SMCO4-201ENST00000298966 HOXB2P14652 356 aa21.8■■□□□ 1.08
SMCO4-201ENST00000298966 ADORA2BP29275 332 aa21.8■■□□□ 1.08
SMCO4-201ENST00000298966 RPS6KA1Q15418 735 aa21.8■■□□□ 1.08
SMCO4-201ENST00000298966 DCUN1D2Q6PH85 259 aa21.8■■□□□ 1.08
SMCO4-201ENST00000298966 ARCQ7LC44 396 aa21.8■■□□□ 1.08
SMCO4-201ENST00000298966 FAM35AQ86V20 835 aa21.8■■□□□ 1.08
SMCO4-201ENST00000298966 XYLT1Q86Y38 959 aa21.8■■□□□ 1.08
SMCO4-201ENST00000298966 PHTF2Q8N3S3 785 aa21.8■■□□□ 1.08
SMCO4-201ENST00000298966 OTUB2Q96DC9 234 aa21.8■■□□□ 1.08
SMCO4-201ENST00000298966 PCED1BQ96HM7 432 aa21.8■■□□□ 1.08
SMCO4-201ENST00000298966 CAMK1GQ96NX5 476 aa21.8■■□□□ 1.08
SMCO4-201ENST00000298966 SLITRK1Q96PX8 696 aa21.8■■□□□ 1.08
SMCO4-201ENST00000298966 NCAPGQ9BPX3 1015 aa21.8■■□□□ 1.08
SMCO4-201ENST00000298966 ST7Q9NRC1 585 aa21.8■■□□□ 1.08
SMCO4-201ENST00000298966 RNF14Q9UBS8 474 aa21.8■■□□□ 1.08
SMCO4-201ENST00000298966 CYTH4Q9UIA0 394 aa21.8■■□□□ 1.08
SMCO4-201ENST00000298966 IGHV1OR15-9A0A0B4J2B8 117 aa21.79■■□□□ 1.08
SMCO4-201ENST00000298966 ENC1O14682 589 aa21.79■■□□□ 1.08
SMCO4-201ENST00000298966 ATMINO43313 823 aaPredicted RBP21.79■■□□□ 1.08
SMCO4-201ENST00000298966 ZNF217O75362 1048 aa21.79■■□□□ 1.08
SMCO4-201ENST00000298966 FTH1P19P0C7X4 201 aa21.79■■□□□ 1.08
SMCO4-201ENST00000298966 DESP17661 470 aa21.79■■□□□ 1.08
SMCO4-201ENST00000298966 TAF10Q12962 218 aa21.79■■□□□ 1.08
SMCO4-201ENST00000298966 PIGHQ14442 188 aaPredicted RBP21.79■■□□□ 1.08
SMCO4-201ENST00000298966 PLEKHG6Q3KR16 790 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms