RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 TPP1O14773 563 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 PPP1R12AO14974 1030 aaPredicted RBP13.53□□□□□ -0.24
RUBCN-202ENST00000296343 BUD23O43709 281 aaKnown RBP13.53□□□□□ -0.24
RUBCN-202ENST00000296343 FSBPO95073 299 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 SLC4A1P02730 911 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 SERPINB4P48594 390 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 CES4AQ5XG92 561 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 FAM219BQ5XKK7 198 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 RASSF3Q86WH2 238 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 ARID3BQ8IVW6 561 aaPredicted RBP13.53□□□□□ -0.24
RUBCN-202ENST00000296343 PABPC5Q96DU9 382 aaKnown RBP13.53□□□□□ -0.24
RUBCN-202ENST00000296343 CAPNS2Q96L46 248 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 C20orf27Q9GZN8 174 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 CCDC134Q9H6E4 229 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 SDR42E2A6NKP2 422 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 DCLK1O15075 740 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 EDF1O60869 148 aaKnown RBP13.53□□□□□ -0.24
RUBCN-202ENST00000296343 CD68P34810 354 aaPredicted RBP13.53□□□□□ -0.24
RUBCN-202ENST00000296343 GLRBP48167 497 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 DPYSQ14117 519 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 TTC39BQ5VTQ0 682 aaPredicted RBP13.53□□□□□ -0.24
RUBCN-202ENST00000296343 BHLHA9Q7RTU4 235 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 TDRPQ86YL5 185 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 THEM5Q8N1Q8 247 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 SLC2A13Q96QE2 648 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 TACO1Q9BSH4 297 aaKnown RBP13.53□□□□□ -0.24
RUBCN-202ENST00000296343 GPR62Q9BZJ7 368 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 TBC1D13Q9NVG8 400 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.53□□□□□ -0.24
RUBCN-202ENST00000296343 EIF4E1BA6NMX2 242 aaKnown RBP13.53□□□□□ -0.24
RUBCN-202ENST00000296343 PRPF4O43172 522 aaKnown RBP eCLIP13.53□□□□□ -0.24
RUBCN-202ENST00000296343 KRT16P08779 473 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 TUBP50607 506 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 SEPT6Q14141 434 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 ITIH4Q14624 930 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 CRYMQ14894 314 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 PSMD5Q16401 504 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 YTHDF3Q7Z739 585 aaKnown RBP13.53□□□□□ -0.24
RUBCN-202ENST00000296343 ALYREFQ86V81 257 aaKnown RBP13.53□□□□□ -0.24
RUBCN-202ENST00000296343 TMEM86AQ8N2M4 240 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 LINC01599Q8WXQ3 324 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 ARNTL2Q8WYA1 636 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 OXNAD1Q96HP4 312 aaPredicted RBP13.53□□□□□ -0.24
RUBCN-202ENST00000296343 EPAS1Q99814 870 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 ACTL7AQ9Y615 435 aa13.53□□□□□ -0.24
RUBCN-202ENST00000296343 RFPL1O75677 317 aa13.52□□□□□ -0.24
RUBCN-202ENST00000296343 SERPINB3P29508 390 aa13.52□□□□□ -0.24
RUBCN-202ENST00000296343 CA8P35219 290 aa13.52□□□□□ -0.24
RUBCN-202ENST00000296343 NCALDP61601 193 aa13.52□□□□□ -0.24
RUBCN-202ENST00000296343 RCN2Q14257 317 aa13.52□□□□□ -0.24
RUBCN-202ENST00000296343 ZNF460Q14592 562 aa13.52□□□□□ -0.24
RUBCN-202ENST00000296343 SETDB1Q15047 1291 aa13.52□□□□□ -0.24
RUBCN-202ENST00000296343 NLRP9Q7RTR0 991 aa13.52□□□□□ -0.24
RUBCN-202ENST00000296343 LIMS2Q7Z4I7 341 aa13.52□□□□□ -0.24
RUBCN-202ENST00000296343 RNF135Q8IUD6 432 aa13.52□□□□□ -0.24
RUBCN-202ENST00000296343 CFAP52Q8N1V2 620 aa13.52□□□□□ -0.24
RUBCN-202ENST00000296343 KCTD13Q8WZ19 329 aa13.52□□□□□ -0.24
RUBCN-202ENST00000296343 NT5C3BQ969T7 300 aa13.52□□□□□ -0.24
RUBCN-202ENST00000296343 KDM4CQ9H3R0 1056 aa13.52□□□□□ -0.24
RUBCN-202ENST00000296343 CHST12Q9NRB3 414 aa13.52□□□□□ -0.24
RUBCN-202ENST00000296343 HEY2Q9UBP5 337 aa13.52□□□□□ -0.24
RUBCN-202ENST00000296343 CEP290O15078 2479 aa13.52□□□□□ -0.25
RUBCN-202ENST00000296343 ZWINTO95229 277 aa13.52□□□□□ -0.25
RUBCN-202ENST00000296343 INHAP05111 366 aa13.52□□□□□ -0.25
RUBCN-202ENST00000296343 TYK2P29597 1187 aa13.52□□□□□ -0.25
RUBCN-202ENST00000296343 C1QTNF8P60827 252 aa13.52□□□□□ -0.25
RUBCN-202ENST00000296343 SARNPP82979 210 aaKnown RBP13.52□□□□□ -0.25
RUBCN-202ENST00000296343 PRSS55Q6UWB4 352 aaPredicted RBP13.52□□□□□ -0.25
RUBCN-202ENST00000296343 NUDCD3Q8IVD9 361 aa13.52□□□□□ -0.25
RUBCN-202ENST00000296343 APOPT1Q96IL0 206 aa13.52□□□□□ -0.25
RUBCN-202ENST00000296343 ACBD6Q9BR61 282 aa13.52□□□□□ -0.25
RUBCN-202ENST00000296343 BRD8Q9H0E9 1235 aa13.52□□□□□ -0.25
RUBCN-202ENST00000296343 G3BP2Q9UN86 482 aaKnown RBP13.52□□□□□ -0.25
RUBCN-202ENST00000296343 ACTL7BQ9Y614 415 aa13.52□□□□□ -0.25
RUBCN-202ENST00000296343 SCN10AQ9Y5Y9 1956 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 H0Y3Z8 333 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 OAS1P00973 400 aaKnown RBP13.51□□□□□ -0.25
RUBCN-202ENST00000296343 C1QAP02745 245 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 BST1Q10588 318 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 SEMA5AQ13591 1074 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 CTXN3Q4LDR2 81 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 CNTD1Q8N815 330 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 FERMT1Q9BQL6 677 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 DHRS4Q9BTZ2 278 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 IARS2Q9NSE4 1012 aaKnown RBP13.51□□□□□ -0.25
RUBCN-202ENST00000296343 C20orf96Q9NUD7 363 aaPredicted RBP13.51□□□□□ -0.25
RUBCN-202ENST00000296343 SENP1Q9P0U3 644 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 GMIPQ9P107 970 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 KRT38O76015 456 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 CNTN5O94779 1100 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 ALDOAP04075 364 aaKnown RBP13.51□□□□□ -0.25
RUBCN-202ENST00000296343 MYL2P10916 166 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 GARSP41250 739 aaKnown RBP13.51□□□□□ -0.25
RUBCN-202ENST00000296343 TM4SF4P48230 202 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 IRF9Q00978 393 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 GRIK3Q13003 919 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 FYB2Q5VWT5 728 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 TAS1R1Q7RTX1 841 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 STRA8Q7Z7C7 330 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 SCD5Q86SK9 330 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms