RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 DDHD1Q8NEL9 900 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 PPHLN1Q8NEY8 458 aaKnown RBP13.72□□□□□ -0.21
HPS3-201ENST00000296051 CCDC167Q9P0B6 97 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 ADGRA3Q8IWK6 1321 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 TMCC1O94876 653 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 KCNA2P16389 499 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 TPP2P29144 1249 aaPredicted RBP13.72□□□□□ -0.21
HPS3-201ENST00000296051 NEDD8Q15843 81 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 SPDYAQ5MJ70 313 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 JADE3Q92613 823 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 ZMAT2Q96NC0 199 aaKnown RBP13.72□□□□□ -0.21
HPS3-201ENST00000296051 CRLS1Q9UJA2 301 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 VAV3Q9UKW4 847 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 NFASCO94856 1347 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 MYH2Q9UKX2 1941 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 CYP3A7-CYP3A51PA0A087WV96 503 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 CYP3A7P24462 503 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 SERPINB8P50452 374 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 NOMO3P69849 1222 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 SLC39A12Q504Y0 691 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 ZNF410Q86VK4 478 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 HPS6Q86YV9 775 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 MAP4K3Q8IVH8 894 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 BLOC1S5Q8TDH9 187 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 EZH1Q92800 747 aaPredicted RBP13.72□□□□□ -0.21
HPS3-201ENST00000296051 LPPQ93052 612 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 PHF21BQ96EK2 531 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 GALNT8Q9NY28 637 aa13.72□□□□□ -0.21
HPS3-201ENST00000296051 PHGDHO43175 533 aaKnown RBP13.71□□□□□ -0.21
HPS3-201ENST00000296051 GRK2P25098 689 aa13.71□□□□□ -0.21
HPS3-201ENST00000296051 CCNFP41002 786 aa13.71□□□□□ -0.21
HPS3-201ENST00000296051 TRIM16LQ309B1 348 aa13.71□□□□□ -0.21
HPS3-201ENST00000296051 OTUD3Q5T2D3 398 aaPredicted RBP13.71□□□□□ -0.21
HPS3-201ENST00000296051 GLIS1Q8NBF1 620 aa13.71□□□□□ -0.21
HPS3-201ENST00000296051 TMEM161BQ8NDZ6 487 aa13.71□□□□□ -0.21
HPS3-201ENST00000296051 DNAJC1Q96KC8 554 aaKnown RBP13.71□□□□□ -0.21
HPS3-201ENST00000296051 PNPOQ9NVS9 261 aa13.71□□□□□ -0.21
HPS3-201ENST00000296051 ARHGEF38Q9NXL2 777 aa13.71□□□□□ -0.21
HPS3-201ENST00000296051 KIAA1257Q9ULG3 409 aa13.71□□□□□ -0.21
HPS3-201ENST00000296051 PARNO95453 639 aaKnown RBP13.71□□□□□ -0.21
HPS3-201ENST00000296051 STMN1P16949 149 aa13.71□□□□□ -0.21
HPS3-201ENST00000296051 ZNF23P17027 643 aa13.71□□□□□ -0.21
HPS3-201ENST00000296051 CYP2F1P24903 491 aa13.71□□□□□ -0.21
HPS3-201ENST00000296051 KCNT2Q6UVM3 1135 aa13.71□□□□□ -0.21
HPS3-201ENST00000296051 RD3Q7Z3Z2 195 aa13.71□□□□□ -0.21
HPS3-201ENST00000296051 C7orf61Q8IZ16 206 aa13.71□□□□□ -0.21
HPS3-201ENST00000296051 ADGRA2Q96PE1 1338 aa13.71□□□□□ -0.21
HPS3-201ENST00000296051 A0A096LPK6 155 aa13.71□□□□□ -0.22
HPS3-201ENST00000296051 F9P00740 461 aa13.71□□□□□ -0.22
HPS3-201ENST00000296051 GJB1P08034 283 aa13.71□□□□□ -0.22
HPS3-201ENST00000296051 ZBTB48P10074 688 aaPredicted RBP13.71□□□□□ -0.22
HPS3-201ENST00000296051 CHRNB2P17787 502 aa13.71□□□□□ -0.22
HPS3-201ENST00000296051 CHRM3P20309 590 aa13.71□□□□□ -0.22
HPS3-201ENST00000296051 NAGLUP54802 743 aa13.71□□□□□ -0.22
HPS3-201ENST00000296051 UGCGQ16739 394 aa13.71□□□□□ -0.22
HPS3-201ENST00000296051 VWA5B1Q5TIE3 1220 aa13.71□□□□□ -0.22
HPS3-201ENST00000296051 FAM228AQ86W67 206 aa13.71□□□□□ -0.22
HPS3-201ENST00000296051 HELQQ8TDG4 1101 aa13.71□□□□□ -0.22
HPS3-201ENST00000296051 TMEM109Q9BVC6 243 aa13.71□□□□□ -0.22
HPS3-201ENST00000296051 ZNF395Q9H8N7 513 aaPredicted RBP13.71□□□□□ -0.22
HPS3-201ENST00000296051 MRPS23Q9Y3D9 190 aaKnown RBP13.71□□□□□ -0.22
HPS3-201ENST00000296051 PKP3Q9Y446 797 aa13.71□□□□□ -0.22
HPS3-201ENST00000296051 FAM208AQ9UK61 1670 aaKnown RBP13.71□□□□□ -0.22
HPS3-201ENST00000296051 XRN1Q8IZH2 1706 aaKnown RBP13.71□□□□□ -0.22
HPS3-201ENST00000296051 hCG_1818297A0A087WSY0 165 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 C1orf232A0A0U1RR37 186 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 LACTBL1A8MY62 500 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 RHOCP08134 193 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 ABHD2P08910 425 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 ECHS1P30084 290 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 TUFMP49411 452 aaKnown RBP13.7□□□□□ -0.22
HPS3-201ENST00000296051 GALK1P51570 392 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 CHN2P52757 468 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 NDST1P52848 882 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 FAM83EQ2M2I3 478 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 FNBP1LQ5T0N5 605 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 CCDC81Q6ZN84 652 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 TSHZ1Q6ZSZ6 1077 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 MAB21L3Q8N8X9 362 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 BHLHE22Q8NFJ8 381 aaPredicted RBP13.7□□□□□ -0.22
HPS3-201ENST00000296051 FAM81AQ8TBF8 368 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 CSGALNACT1Q8TDX6 532 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 TMEM176AQ96HP8 235 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 NRDE2Q9H7Z3 1164 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 AP4E1Q9UPM8 1137 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.7□□□□□ -0.22
HPS3-201ENST00000296051 NID2Q14112 1375 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 APOC4-APOC2K7ER74 178 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 TPP1O14773 563 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 APOC2P02655 101 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 VAV1P15498 845 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 BDNFP23560 247 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 PLD1Q13393 1074 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 WDR49Q8IV35 697 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 RGL4Q8IZJ4 473 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 PCYOX1LQ8NBM8 494 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 JOSD2Q8TAC2 188 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 VCPIP1Q96JH7 1222 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 SENP8Q96LD8 212 aa13.7□□□□□ -0.22
HPS3-201ENST00000296051 DMAP1Q9NPF5 467 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms