RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 GGA2Q9UJY4 613 aa9.67□□□□□ -0.86
CNOT9-202ENST00000295701 ANKRD6Q9Y2G4 727 aa9.67□□□□□ -0.86
CNOT9-202ENST00000295701 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.67□□□□□ -0.86
CNOT9-202ENST00000295701 IGSF10Q6WRI0 2623 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 FAM237AA0A1B0GTK4 181 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 TRABD2BA6NFA1 517 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 TTLL8A6PVC2 850 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 RNF225M0QZC1 329 aaPredicted RBP9.66□□□□□ -0.86
CNOT9-202ENST00000295701 CBX4O00257 560 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 TBL1XO60907 577 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 DKK1O94907 266 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 SEMA4FO95754 770 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 MYL1P05976 194 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 PABPC1P11940 636 aaKnown RBP9.66□□□□□ -0.86
CNOT9-202ENST00000295701 CD19P15391 556 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 RPL13P26373 211 aaKnown RBP9.66□□□□□ -0.86
CNOT9-202ENST00000295701 HARS2P49590 506 aaKnown RBP9.66□□□□□ -0.86
CNOT9-202ENST00000295701 AFF3P51826 1226 aaKnown RBP9.66□□□□□ -0.86
CNOT9-202ENST00000295701 PMS1P54277 932 aaKnown RBP9.66□□□□□ -0.86
CNOT9-202ENST00000295701 ENPEPQ07075 957 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 FAM133BQ5BKY9 247 aaKnown RBP9.66□□□□□ -0.86
CNOT9-202ENST00000295701 ADGRF1Q5T601 910 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 TCERG1LQ5VWI1 586 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 IL27RAQ6UWB1 636 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 KRBA2Q6ZNG9 492 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 HSCBQ8IWL3 235 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 CLEC4CQ8WTT0 213 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 RNF139Q8WU17 664 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 TFAP2BQ92481 460 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 CCDC47Q96A33 483 aaKnown RBP9.66□□□□□ -0.86
CNOT9-202ENST00000295701 MYO19Q96H55 970 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 LRIG1Q96JA1 1093 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 IPO9Q96P70 1041 aaKnown RBP9.66□□□□□ -0.86
CNOT9-202ENST00000295701 ZSWIM1Q9BR11 485 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 GDPD2Q9HCC8 539 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 SERGEFQ9UGK8 458 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 STOML2Q9UJZ1 356 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 INTS6Q9UL03 887 aaKnown RBP9.66□□□□□ -0.86
CNOT9-202ENST00000295701 PLA2G4CQ9UP65 541 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 HBS1LQ9Y450 684 aaKnown RBP9.66□□□□□ -0.86
CNOT9-202ENST00000295701 PCDHGB2Q9Y5G2 931 aa9.66□□□□□ -0.86
CNOT9-202ENST00000295701 FAM47DPA6NHR8 397 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 O00370 1275 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 WNT9AO14904 365 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 FLRT2O43155 660 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 ZNF202O95125 648 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 WNT1P04628 370 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 EPB41P11171 864 aaKnown RBP9.65□□□□□ -0.86
CNOT9-202ENST00000295701 PRCPP42785 496 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 CTSOP43234 321 aaPredicted RBP9.65□□□□□ -0.86
CNOT9-202ENST00000295701 CTSKP43235 329 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 NUMBP49757 651 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 BCAT1P54687 386 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 DAOAP59103 153 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 BST2Q10589 180 aaKnown RBP9.65□□□□□ -0.86
CNOT9-202ENST00000295701 PNOCQ13519 176 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 CUL2Q13617 745 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 SGO2Q562F6 1265 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 DCAF17Q5H9S7 520 aaPredicted RBP9.65□□□□□ -0.86
CNOT9-202ENST00000295701 PIK3R6Q5UE93 754 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 NADSYN1Q6IA69 706 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 PMF1Q6P1K2 205 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 DHRS13Q6UX07 377 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 MMS22LQ6ZRQ5 1243 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 GATAD2AQ86YP4 633 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 UBR7Q8N806 425 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.65□□□□□ -0.86
CNOT9-202ENST00000295701 WFIKKN2Q8TEU8 576 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 ERCC4Q92889 916 aaPredicted RBP9.65□□□□□ -0.86
CNOT9-202ENST00000295701 KAT5Q92993 513 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 CDC6Q99741 560 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 DNAI2Q9GZS0 605 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 BTBD1Q9H0C5 482 aa9.65□□□□□ -0.86
CNOT9-202ENST00000295701 OLA1Q9NTK5 396 aaKnown RBP9.65□□□□□ -0.86
CNOT9-202ENST00000295701 NYNRINQ9P2P1 1898 aaKnown RBP9.65□□□□□ -0.86
CNOT9-202ENST00000295701 CETN3O15182 167 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 MID1O15344 667 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 SPINT1O43278 529 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 ACSL4O60488 711 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 SIN3BO75182 1162 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 IGLV3-27P01718 113 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 DNTTP04053 509 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 IGHV4-34P06331 123 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 DLDP09622 509 aaKnown RBP9.64□□□□□ -0.87
CNOT9-202ENST00000295701 VSIG8P0DPA2 414 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 VDRP11473 427 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 POLR2EP19388 210 aaKnown RBP9.64□□□□□ -0.87
CNOT9-202ENST00000295701 CD27P26842 260 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 GALCP54803 685 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 SLC8A3P57103 927 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 RPS24P62847 133 aaKnown RBP9.64□□□□□ -0.87
CNOT9-202ENST00000295701 SUZ12Q15022 739 aaKnown RBP9.64□□□□□ -0.87
CNOT9-202ENST00000295701 SHBQ15464 509 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 TEAD4Q15561 434 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.64□□□□□ -0.87
CNOT9-202ENST00000295701 EDRF1Q3B7T1 1238 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 FSCBQ5H9T9 825 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 ZNF776Q68DI1 518 aaPredicted RBP9.64□□□□□ -0.87
CNOT9-202ENST00000295701 ANKRD40Q6AI12 368 aa9.64□□□□□ -0.87
CNOT9-202ENST00000295701 MSANTD2Q6P1R3 559 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms