RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 KIF2BQ8N4N8 673 aa14.35□□□□□ -0.11
NXF1-201ENST00000294172 CD99L2Q8TCZ2 262 aa14.35□□□□□ -0.11
NXF1-201ENST00000294172 KLHL29Q96CT2 875 aa14.35□□□□□ -0.11
NXF1-201ENST00000294172 HDAC11Q96DB2 347 aa14.35□□□□□ -0.11
NXF1-201ENST00000294172 APOL2Q9BQE5 337 aa14.35□□□□□ -0.11
NXF1-201ENST00000294172 GORASP1Q9BQQ3 440 aa14.35□□□□□ -0.11
NXF1-201ENST00000294172 TRIM62Q9BVG3 475 aa14.35□□□□□ -0.11
NXF1-201ENST00000294172 ABCC13Q9NSE7 274 aa14.35□□□□□ -0.11
NXF1-201ENST00000294172 UBP1Q9NZI7 540 aa14.35□□□□□ -0.11
NXF1-201ENST00000294172 SRRDQ9UH36 339 aa14.35□□□□□ -0.11
NXF1-201ENST00000294172 TRIM33Q9UPN9 1127 aa14.35□□□□□ -0.11
NXF1-201ENST00000294172 A0A0G2JND7 137 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 AP2A1O95782 977 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 POLBP06746 335 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 ERVK-10P10266 1014 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 NFKB1P19838 968 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 PAX3P23760 479 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 CD68P34810 354 aaPredicted RBP14.34□□□□□ -0.11
NXF1-201ENST00000294172 KCNJ2P63252 427 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 NOGQ13253 232 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 PLEKHG4Q58EX7 1191 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 NOMO2Q5JPE7 1267 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 CHSY1Q86X52 802 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 RFWD2Q8NHY2 731 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 RAET1EQ8TD07 263 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 USP33Q8TEY7 942 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 CASP10Q92851 521 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 BRD8Q9H0E9 1235 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 DNAJB4Q9UDY4 337 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 PSAT1Q9Y617 370 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 TTC3P53804 2025 aa14.34□□□□□ -0.11
NXF1-201ENST00000294172 ARHGAP42A6NI28 874 aa14.33□□□□□ -0.11
NXF1-201ENST00000294172 IRAK2O43187 625 aa14.33□□□□□ -0.11
NXF1-201ENST00000294172 MTSS1O43312 755 aa14.33□□□□□ -0.11
NXF1-201ENST00000294172 DCTN3O75935 186 aa14.33□□□□□ -0.11
NXF1-201ENST00000294172 EOMESO95936 686 aa14.33□□□□□ -0.11
NXF1-201ENST00000294172 TOP3BO95985 862 aaKnown RBP14.33□□□□□ -0.11
NXF1-201ENST00000294172 MOCS2O96007 188 aaPredicted RBP14.33□□□□□ -0.11
NXF1-201ENST00000294172 NIPAL4Q0D2K0 466 aa14.33□□□□□ -0.11
NXF1-201ENST00000294172 CCDC15Q0P6D6 951 aa14.33□□□□□ -0.11
NXF1-201ENST00000294172 TEX44Q53QW1 395 aa14.33□□□□□ -0.11
NXF1-201ENST00000294172 CYS1Q717R9 158 aa14.33□□□□□ -0.11
NXF1-201ENST00000294172 RASSF3Q86WH2 238 aa14.33□□□□□ -0.11
NXF1-201ENST00000294172 URGCPQ8TCY9 931 aa14.33□□□□□ -0.11
NXF1-201ENST00000294172 LINC01599Q8WXQ3 324 aa14.33□□□□□ -0.11
NXF1-201ENST00000294172 APBB2Q92870 758 aa14.33□□□□□ -0.11
NXF1-201ENST00000294172 FAM193BQ96PV7 902 aaPredicted RBP14.33□□□□□ -0.11
NXF1-201ENST00000294172 NAT9Q9BTE0 207 aa14.33□□□□□ -0.11
NXF1-201ENST00000294172 GBA3Q9H227 469 aa14.33□□□□□ -0.11
NXF1-201ENST00000294172 ZFATQ9P243 1243 aa14.33□□□□□ -0.11
NXF1-201ENST00000294172 VANGL2Q9ULK5 521 aa14.33□□□□□ -0.11
NXF1-201ENST00000294172 SQORQ9Y6N5 450 aa14.33□□□□□ -0.11
NXF1-201ENST00000294172 CCDC195A0A1B0GUA6 201 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 TNFRSF10BO14763 440 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 PAGE1O75459 146 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 IGLV3-25P01717 112 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 CCNFP41002 786 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 ZNF135P52742 658 aaPredicted RBP14.33□□□□□ -0.12
NXF1-201ENST00000294172 IRX4P78413 519 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 DDR2Q16832 855 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 MAP3K21Q5TCX8 1036 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 TRAF7Q6Q0C0 670 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 PACS1Q6VY07 963 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 ARHGAP36Q6ZRI8 547 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 MARK2Q7KZI7 788 aaKnown RBP14.33□□□□□ -0.12
NXF1-201ENST00000294172 NLRP9Q7RTR0 991 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 SCD5Q86SK9 330 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 CEP57Q86XR8 500 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 PARP9Q8IXQ6 854 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 SCML4Q8N228 414 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 HHIPL1Q96JK4 782 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 TRIM55Q9BYV6 548 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 OSBPL2Q9H1P3 480 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 NMUR1Q9HB89 426 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 TBC1D13Q9NVG8 400 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 BFARQ9NZS9 450 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 TXNDC16Q9P2K2 825 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 TRHDEQ9UKU6 1024 aa14.33□□□□□ -0.12
NXF1-201ENST00000294172 A0A1W2PQH9 124 aa14.32□□□□□ -0.12
NXF1-201ENST00000294172 CFAP73A6NFT4 308 aa14.32□□□□□ -0.12
NXF1-201ENST00000294172 ATP9BO43861 1147 aa14.32□□□□□ -0.12
NXF1-201ENST00000294172 TADA2AO75478 443 aa14.32□□□□□ -0.12
NXF1-201ENST00000294172 TRPA1O75762 1119 aa14.32□□□□□ -0.12
NXF1-201ENST00000294172 ZNF189O75820 626 aaPredicted RBP14.32□□□□□ -0.12
NXF1-201ENST00000294172 TPH1P17752 444 aa14.32□□□□□ -0.12
NXF1-201ENST00000294172 CCR1P32246 355 aa14.32□□□□□ -0.12
NXF1-201ENST00000294172 GPR15P49685 360 aa14.32□□□□□ -0.12
NXF1-201ENST00000294172 ELF3P78545 371 aaPredicted RBP14.32□□□□□ -0.12
NXF1-201ENST00000294172 ITPRIPL1Q6GPH6 555 aa14.32□□□□□ -0.12
NXF1-201ENST00000294172 ZNF669Q96BR6 464 aaPredicted RBP14.32□□□□□ -0.12
NXF1-201ENST00000294172 FCRL3Q96P31 734 aaPredicted RBP14.32□□□□□ -0.12
NXF1-201ENST00000294172 MLPHQ9BV36 600 aaPredicted RBP14.32□□□□□ -0.12
NXF1-201ENST00000294172 CD248Q9HCU0 757 aa14.32□□□□□ -0.12
NXF1-201ENST00000294172 STARD7Q9NQZ5 370 aa14.32□□□□□ -0.12
NXF1-201ENST00000294172 ARHGEF38Q9NXL2 777 aa14.32□□□□□ -0.12
NXF1-201ENST00000294172 SHROOM3Q8TF72 1996 aa14.32□□□□□ -0.12
NXF1-201ENST00000294172 MOXD2PA6NHM9 499 aa14.32□□□□□ -0.12
NXF1-201ENST00000294172 TPP1O14773 563 aa14.32□□□□□ -0.12
NXF1-201ENST00000294172 CNTFP26441 200 aa14.32□□□□□ -0.12
NXF1-201ENST00000294172 HOXD10P28358 340 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms