RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 CASP4P49662 377 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 SCNN1BP51168 640 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 CCNG1P51959 295 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 PPP4CP60510 307 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 SEZ6Q53EL9 994 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 SCARA3Q6AZY7 606 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 SLFN11Q7Z7L1 901 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 FNDC5Q8NAU1 212 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 PHACTR1Q9C0D0 580 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 EPB41L4BQ9H329 900 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 SAR1AQ9NR31 198 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 ANKEF1Q9NU02 776 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 CMTM6Q9NX76 183 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 ARHGAP20Q9P2F6 1191 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 VTI1BQ9UEU0 232 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 SHOC2Q9UQ13 582 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 CYP11B2P19099 503 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 PKNOX1P55347 436 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 RHAGQ02094 409 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 EIF2B5Q13144 721 aaKnown RBP10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 AMHR2Q16671 573 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 EFCAB12Q6NXP0 572 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 KLHL24Q6TFL4 600 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 PTAR1Q7Z6K3 402 aaPredicted RBP10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 MIB1Q86YT6 1006 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 SEMA4DQ92854 862 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 TEKT5Q96M29 485 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 PCDH9Q9HC56 1237 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 ABI2Q9NYB9 513 aaPredicted RBP10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 UBP1Q9NZI7 540 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 CTDNEP1O95476 244 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 F9P00740 461 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 ANXA6P08133 673 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 WARSP23381 471 aaKnown RBP10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 GP5P40197 560 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 OR1G1P47890 313 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 SLC11A2P49281 568 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 ZNF268Q14587 947 aaPredicted RBP10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 PKN1Q16512 942 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 PHKG1Q16816 387 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 MZT2BQ6NZ67 158 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 UTS2BQ765I0 119 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 ZNF571Q7Z3V5 609 aaPredicted RBP10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 TMC3Q7Z5M5 1100 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 POC5Q8NA72 575 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 OR7A2PQ8NGA2 310 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 ZNF75CPQ92670 426 aaPredicted RBP10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 ABCB10Q9NRK6 738 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 SNX8Q9Y5X2 465 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 GRIN2DO15399 1336 aa10.95□□□□□ -0.66
PKNOX1-201ENST00000291547 PKD1L3Q7Z443 1732 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 MATN2O00339 956 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 CNPP09543 421 aaKnown RBP10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 MSH3P20585 1137 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 PNPLA4P41247 253 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 ABATP80404 500 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 CDK16Q00536 496 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 TIGD7Q6NT04 549 aaPredicted RBP10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 ACOT1Q86TX2 421 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 SAPCD2Q86UD0 394 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 MICALL2Q8IY33 904 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 ITFG1Q8TB96 612 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 APOPT1Q96IL0 206 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 L3MBTL3Q96JM7 780 aaPredicted RBP10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 GDF3Q9NR23 364 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 VPS45Q9NRW7 570 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 CLIC5Q9NZA1 410 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 NYAP2Q9P242 653 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 USP18Q9UMW8 372 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 AP4E1Q9UPM8 1137 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 IDH3BO43837 385 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 ENDOD1O94919 500 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 CYP2C9P11712 490 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 STAT5AP42229 794 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 NUMBP49757 651 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 PARP6Q2NL67 630 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 NDUFAF6Q330K2 333 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 TMEM63BQ5T3F8 832 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 ATG14Q6ZNE5 492 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 APOBEC3FQ8IUX4 373 aaKnown RBP10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 EMC1Q8N766 993 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 RNASE11Q8TAA1 199 aaKnown RBP10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 MAN1C1Q9NR34 630 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 VANGL2Q9ULK5 521 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 CNTNAP5Q8WYK1 1306 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 COL18A1P39060 1754 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 A0A0A6YYK5 440 aaPredicted RBP10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 SYNCRIPO60506 623 aaKnown RBP10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 KATNA1O75449 491 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 UPP2O95045 317 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 PGM3O95394 542 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 SEC24AO95486 1093 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 CRTAMO95727 393 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 MPOP05164 745 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 C6orf222P0C671 652 aaPredicted RBP10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 FAM153BP0C7A2 387 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 VDRP11473 427 aa10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 POLR2EP19388 210 aaKnown RBP10.94□□□□□ -0.66
PKNOX1-201ENST00000291547 SSTR1P30872 391 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 243.1 ms