RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 FSHRP23945 695 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 CYP4F8P98187 520 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 ZNF33AQ06730 810 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 PAFAH1B3Q15102 231 aaKnown RBP8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 TXNRD3NBQ6F5E7 133 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 BZW1Q7L1Q6 419 aaKnown RBP8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 LZTR1Q8N653 840 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 GPR161Q8N6U8 529 aaKnown RBP8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 SLCO2A1Q92959 643 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 CACYBPQ9HB71 228 aaKnown RBP8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 HS3ST4Q9Y661 456 aa8.68□□□□□ -1.02
PTPDC1-201ENST00000288976 APOC4-APOC2K7ER74 178 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 SOX1O00570 391 aaPredicted RBP8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 MSI1O43347 362 aaKnown RBP8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 APOC2P02655 101 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 FNTAP49354 379 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 TEAD2Q15562 447 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 ZNF77Q15935 545 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 ZC3H12AQ5D1E8 599 aaKnown RBP8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 MS4A13Q5J8X5 152 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 RABGAP1LQ5R372 815 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 GPR158Q5T848 1215 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 MFSD7Q6UXD7 560 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 LRRC49Q8IUZ0 686 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 CELF5Q8N6W0 485 aaKnown RBP8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 ZNF557Q8N988 423 aaPredicted RBP8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 ADAMTS19Q8TE59 1207 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 CSPG4P5Q96PW8 444 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 RNF38Q9H0F5 515 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 MFSD1Q9H3U5 465 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 DHX35Q9H5Z1 703 aaKnown RBP8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 TMEM248Q9NWD8 314 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 COL4A3Q01955 1670 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 A0A1W2PRU2 124 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 RFXAPO00287 272 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 DCLK1O15075 740 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 PHF2O75151 1096 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 COL4A2P08572 1712 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 HDCP19113 662 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 IL4RP24394 825 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 HPDP32754 393 aaPredicted RBP8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 MAPKAPK2P49137 400 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 ATXN1P54253 815 aaKnown RBP8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 MLLT6P55198 1093 aaPredicted RBP8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 XRCC4Q13426 336 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 SIX1Q15475 284 aaPredicted RBP8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 CA9Q16790 459 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 LONRF2Q1L5Z9 754 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 SLC5A9Q2M3M2 681 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 RAB6CQ53S08 254 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 RARS2Q5T160 578 aaKnown RBP8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 PIK3R6Q5UE93 754 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 DAB2IPQ5VWQ8 1189 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 SYCE2Q6PIF2 218 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 ZNF783Q6ZMS7 281 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 GRASPQ7Z6J2 395 aaPredicted RBP8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 MMGT1Q8N4V1 131 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 ADAM32Q8TC27 787 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 RAB6CQ9H0N0 254 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 LRRC19Q9H756 370 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 HCFC1R1Q9NWW0 138 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 OR12D3Q9UGF7 316 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 HACD1B0YJ81 288 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 NCAM2O15394 837 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 FGGP02679 453 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 CEBPBP17676 345 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 CHRNA3P32297 505 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 SERPINB6P35237 376 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 TPI1P60174 286 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 SMTNL2Q2TAL5 461 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 GLE1Q53GS7 698 aaKnown RBP8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 AFMIDQ63HM1 303 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 CES5AQ6NT32 575 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 LRRC31Q6UY01 552 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 SYDE1Q6ZW31 735 aaPredicted RBP8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 SZRD1Q7Z422 152 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 APOL5Q9BWW9 433 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 RABEP2Q9H5N1 569 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 TBC1D14Q9P2M4 693 aa8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 MRPS23Q9Y3D9 190 aaKnown RBP8.67□□□□□ -1.02
PTPDC1-201ENST00000288976 E9PAM4 449 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 F5H423 210 aaPredicted RBP8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 SLC9A3R1O14745 358 aaPredicted RBP8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 LINC01565O15544 149 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 ASMTLO95671 621 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 RHOQP17081 205 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 ATXN3P54252 364 aaPredicted RBP8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 CCNG2Q16589 344 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 MPP7Q5T2T1 576 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 PRR23CQ6ZRP0 262 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 SMRP1Q8NCR6 262 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 GRK7Q8WTQ7 553 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 SLC46A2Q9BY10 475 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 MAP10Q9P2G4 905 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 CPQQ9Y646 472 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 LEFTY2O00292 366 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 SRGAP2O75044 1071 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 TBX10O75333 385 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 TBX18O95935 607 aa8.66□□□□□ -1.02
PTPDC1-201ENST00000288976 CORO1AP31146 461 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms