RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 NRDE2Q9H7Z3 1164 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 PCDH9Q9HC56 1237 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 ANGPTL2Q9UKU9 493 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 PCDHGA4Q9Y5G9 962 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 DSG1Q02413 1049 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 OLIG2Q13516 323 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 CES3Q6UWW8 571 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 MARK2Q7KZI7 788 aaKnown RBP13.22□□□□□ -0.29
ZIC3-201ENST00000287538 PPIL6Q8IXY8 311 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 ST13P4Q8IZP2 240 aaPredicted RBP13.22□□□□□ -0.29
ZIC3-201ENST00000287538 RIBC1Q8N443 379 aaPredicted RBP13.22□□□□□ -0.29
ZIC3-201ENST00000287538 CFAP61Q8NHU2 1237 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 ZNF75CPQ92670 426 aaPredicted RBP13.22□□□□□ -0.29
ZIC3-201ENST00000287538 NMD3Q96D46 503 aaKnown RBP13.22□□□□□ -0.29
ZIC3-201ENST00000287538 FAM161BQ96MY7 647 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 HAPLN3Q96S86 360 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 CREBZFQ9NS37 354 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 IL1RAPL1Q9NZN1 696 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 ADAMTS4O75173 837 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 TADA2AO75478 443 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 INHAP05111 366 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 ESRRAP11474 423 aaPredicted RBP13.22□□□□□ -0.29
ZIC3-201ENST00000287538 GABRB2P47870 512 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 MRPS5P82675 430 aaKnown RBP13.22□□□□□ -0.29
ZIC3-201ENST00000287538 CAV1Q03135 178 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 MAP7Q14244 749 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 DDR2Q16832 855 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.22□□□□□ -0.29
ZIC3-201ENST00000287538 SLC39A12Q504Y0 691 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 SPATA24Q86W54 205 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 CRYBG2Q8N1P7 616 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 PRR11Q96HE9 360 aaPredicted RBP13.22□□□□□ -0.29
ZIC3-201ENST00000287538 SCLYQ96I15 445 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 TTC1Q99614 292 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 SMOQ99835 787 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 SFMBT1Q9UHJ3 866 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 STAP1Q9ULZ2 295 aa13.22□□□□□ -0.29
ZIC3-201ENST00000287538 CEP290O15078 2479 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 MSI1O43347 362 aaKnown RBP13.21□□□□□ -0.29
ZIC3-201ENST00000287538 KPNA6O60684 536 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 ITGAVP06756 1048 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 CPA2P48052 419 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 TM4SF4P48230 202 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 LVRNQ6Q4G3 990 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 PAQR9Q6ZVX9 377 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 PID1Q7Z2X4 250 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 ZCCHC9Q8N567 271 aaKnown RBP13.21□□□□□ -0.29
ZIC3-201ENST00000287538 PQLC3Q8N755 202 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 OLFM3Q96PB7 478 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 PIGVQ9NUD9 493 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 TMLHEQ9NVH6 421 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 DNAJB4Q9UDY4 337 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 SLC27A5Q9Y2P5 690 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 A0A1W2PPM1 405 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 SCAMP3O14828 347 aaKnown RBP13.21□□□□□ -0.29
ZIC3-201ENST00000287538 PGM1P36871 562 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 SLC10A2Q12908 348 aaPredicted RBP13.21□□□□□ -0.29
ZIC3-201ENST00000287538 EFHC2Q5JST6 749 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 C1QTNF12Q5T7M4 302 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 RNASEH2BQ5TBB1 312 aaKnown RBP13.21□□□□□ -0.29
ZIC3-201ENST00000287538 SPATA2LQ8IUW3 424 aaPredicted RBP13.21□□□□□ -0.29
ZIC3-201ENST00000287538 ATXN7L3BQ96GX2 97 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 ECSITQ9BQ95 431 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 FBXO6Q9NRD1 293 aaPredicted RBP13.21□□□□□ -0.29
ZIC3-201ENST00000287538 TAS2R1Q9NYW7 299 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 SRRDQ9UH36 339 aa13.21□□□□□ -0.29
ZIC3-201ENST00000287538 FAM72CH0Y354 149 aa13.21□□□□□ -0.3
ZIC3-201ENST00000287538 EEF2KO00418 725 aaKnown RBP13.21□□□□□ -0.3
ZIC3-201ENST00000287538 ALDH1A1P00352 501 aa13.21□□□□□ -0.3
ZIC3-201ENST00000287538 HOXD10P28358 340 aa13.21□□□□□ -0.3
ZIC3-201ENST00000287538 ACADSBP45954 432 aa13.21□□□□□ -0.3
ZIC3-201ENST00000287538 SPOUT1Q5T280 376 aaKnown RBP13.21□□□□□ -0.3
ZIC3-201ENST00000287538 FAM72AQ5TYM5 149 aa13.21□□□□□ -0.3
ZIC3-201ENST00000287538 FAM72DQ6L9T8 149 aa13.21□□□□□ -0.3
ZIC3-201ENST00000287538 RGS9BPQ6ZS82 235 aa13.21□□□□□ -0.3
ZIC3-201ENST00000287538 FAM72BQ86X60 149 aa13.21□□□□□ -0.3
ZIC3-201ENST00000287538 NAT14Q8WUY8 206 aa13.21□□□□□ -0.3
ZIC3-201ENST00000287538 NKD2Q969F2 451 aaPredicted RBP13.21□□□□□ -0.3
ZIC3-201ENST00000287538 PTCD3Q96EY7 689 aaKnown RBP13.21□□□□□ -0.3
ZIC3-201ENST00000287538 MPP4Q96JB8 637 aa13.21□□□□□ -0.3
ZIC3-201ENST00000287538 CSPG4P5Q96PW8 444 aa13.21□□□□□ -0.3
ZIC3-201ENST00000287538 Q9Y3F1 56 aa13.21□□□□□ -0.3
ZIC3-201ENST00000287538 RNASEH1O60930 286 aaKnown RBP13.2□□□□□ -0.3
ZIC3-201ENST00000287538 FAM155BO75949 473 aa13.2□□□□□ -0.3
ZIC3-201ENST00000287538 ODC1P11926 461 aa13.2□□□□□ -0.3
ZIC3-201ENST00000287538 IL4RP24394 825 aa13.2□□□□□ -0.3
ZIC3-201ENST00000287538 SERPINB3P29508 390 aa13.2□□□□□ -0.3
ZIC3-201ENST00000287538 L1CAMP32004 1257 aa13.2□□□□□ -0.3
ZIC3-201ENST00000287538 GRK4P32298 578 aa13.2□□□□□ -0.3
ZIC3-201ENST00000287538 MATKP42679 507 aa13.2□□□□□ -0.3
ZIC3-201ENST00000287538 TSPY1Q01534 308 aa13.2□□□□□ -0.3
ZIC3-201ENST00000287538 SPDYAQ5MJ70 313 aa13.2□□□□□ -0.3
ZIC3-201ENST00000287538 LRRTM3Q86VH5 581 aa13.2□□□□□ -0.3
ZIC3-201ENST00000287538 GDAP2Q9NXN4 497 aa13.2□□□□□ -0.3
ZIC3-201ENST00000287538 LRFN2Q9ULH4 789 aa13.2□□□□□ -0.3
ZIC3-201ENST00000287538 DRG1Q9Y295 367 aaKnown RBP13.2□□□□□ -0.3
ZIC3-201ENST00000287538 XPO1O14980 1071 aaKnown RBP13.2□□□□□ -0.3
ZIC3-201ENST00000287538 PRPF4O43172 522 aaKnown RBP eCLIP13.2□□□□□ -0.3
ZIC3-201ENST00000287538 USP1O94782 785 aa13.2□□□□□ -0.3
ZIC3-201ENST00000287538 VAV1P15498 845 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms