RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 TMEM248Q9NWD8 314 aa22.44■■□□□ 1.18
PDLIM3-203ENST00000284771 STIM2Q9P246 746 aa22.44■■□□□ 1.18
PDLIM3-203ENST00000284771 CDC23Q9UJX2 597 aa22.44■■□□□ 1.18
PDLIM3-203ENST00000284771 WASH4PA8MWX3 477 aa22.43■■□□□ 1.18
PDLIM3-203ENST00000284771 ARNTLO00327 626 aa22.43■■□□□ 1.18
PDLIM3-203ENST00000284771 DHCR24Q15392 516 aa22.43■■□□□ 1.18
PDLIM3-203ENST00000284771 MPPE1Q53F39 396 aa22.43■■□□□ 1.18
PDLIM3-203ENST00000284771 RABGAP1LQ5R372 815 aa22.43■■□□□ 1.18
PDLIM3-203ENST00000284771 RNF43Q68DV7 783 aa22.43■■□□□ 1.18
PDLIM3-203ENST00000284771 NPNTQ6UXI9 565 aa22.43■■□□□ 1.18
PDLIM3-203ENST00000284771 PLCD3Q8N3E9 789 aa22.43■■□□□ 1.18
PDLIM3-203ENST00000284771 WFDC5Q8TCV5 224 aa22.43■■□□□ 1.18
PDLIM3-203ENST00000284771 NOL6Q9H6R4 1146 aaKnown RBP22.43■■□□□ 1.18
PDLIM3-203ENST00000284771 CATSPERBQ9H7T0 1116 aa22.43■■□□□ 1.18
PDLIM3-203ENST00000284771 THG1LQ9NWX6 298 aaKnown RBP22.43■■□□□ 1.18
PDLIM3-203ENST00000284771 FGF10O15520 208 aaPredicted RBP22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 MAP3K6O95382 1288 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 PENKP01210 267 aaPredicted RBP22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 CYP17A1P05093 508 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 PECAM1P16284 738 aaPredicted RBP22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 CETN2P41208 172 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 IFNAR2P48551 515 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 CDH4P55283 916 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 GBE1Q04446 702 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 LONRF2Q1L5Z9 754 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 AAK1Q2M2I8 961 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 MPP7Q5T2T1 576 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 HJURPQ8NCD3 748 aaPredicted RBP22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 DEPDC1BQ8WUY9 529 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 TRMT61BQ9BVS5 477 aaKnown RBP22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 GTSE1Q9NYZ3 720 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 R3HDM2Q9Y2K5 976 aaKnown RBP22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 MRFAP1Q9Y605 127 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 A0A1B0GVM2 712 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 TCAF2A6NFQ2 919 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 APOL1O14791 398 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 TJP3O95049 919 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 ASGR2P07307 311 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 GDI1P31150 447 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 TFDP2Q14188 446 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 PAFAH1B3Q15102 231 aaKnown RBP22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 FSCBQ5H9T9 825 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 TMCO3Q6UWJ1 677 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 CCDC33Q8N5R6 958 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 HAUS1Q96CS2 278 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 FAM118BQ9BPY3 351 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 MARK1Q9P0L2 795 aa22.42■■□□□ 1.18
PDLIM3-203ENST00000284771 LOC730098B7Z3J9 87 aa22.41■■□□□ 1.18
PDLIM3-203ENST00000284771 NEDD8-MDP1E9PL57 170 aa22.41■■□□□ 1.18
PDLIM3-203ENST00000284771 PGRMC1O00264 195 aaKnown RBP22.41■■□□□ 1.18
PDLIM3-203ENST00000284771 CHADO15335 359 aa22.41■■□□□ 1.18
PDLIM3-203ENST00000284771 MFSD11O43934 449 aa22.41■■□□□ 1.18
PDLIM3-203ENST00000284771 CLDN11O75508 207 aa22.41■■□□□ 1.18
PDLIM3-203ENST00000284771 GAB4Q2WGN9 574 aa22.41■■□□□ 1.18
PDLIM3-203ENST00000284771 ANO4Q32M45 955 aa22.41■■□□□ 1.18
PDLIM3-203ENST00000284771 C1orf228Q6PIY5 440 aa22.41■■□□□ 1.18
PDLIM3-203ENST00000284771 CHST9Q7L1S5 443 aa22.41■■□□□ 1.18
PDLIM3-203ENST00000284771 SLC44A3Q8N4M1 653 aa22.41■■□□□ 1.18
PDLIM3-203ENST00000284771 BBS2Q9BXC9 721 aa22.41■■□□□ 1.18
PDLIM3-203ENST00000284771 AP1M1Q9BXS5 423 aa22.41■■□□□ 1.18
PDLIM3-203ENST00000284771 ECT2Q9H8V3 914 aa22.41■■□□□ 1.18
PDLIM3-203ENST00000284771 DTLQ9NZJ0 730 aa22.41■■□□□ 1.18
PDLIM3-203ENST00000284771 THEGQ9P2T0 379 aa22.41■■□□□ 1.18
PDLIM3-203ENST00000284771 TBC1D30Q9Y2I9 924 aa22.41■■□□□ 1.18
PDLIM3-203ENST00000284771 CHD5Q8TDI0 1954 aa22.41■■□□□ 1.18
PDLIM3-203ENST00000284771 TYRP14679 529 aa22.4■■□□□ 1.18
PDLIM3-203ENST00000284771 OR1E1P30953 314 aa22.4■■□□□ 1.18
PDLIM3-203ENST00000284771 PDGFRLQ15198 375 aa22.4■■□□□ 1.18
PDLIM3-203ENST00000284771 TTC39BQ5VTQ0 682 aaPredicted RBP22.4■■□□□ 1.18
PDLIM3-203ENST00000284771 CXorf57Q6NSI4 855 aaKnown RBP22.4■■□□□ 1.18
PDLIM3-203ENST00000284771 ARHGAP12Q8IWW6 846 aa22.4■■□□□ 1.18
PDLIM3-203ENST00000284771 YAF2Q8IY57 180 aa22.4■■□□□ 1.18
PDLIM3-203ENST00000284771 UMODL1-AS1Q8N2C9 162 aa22.4■■□□□ 1.18
PDLIM3-203ENST00000284771 ATP2A3Q93084 1043 aa22.4■■□□□ 1.18
PDLIM3-203ENST00000284771 CELF6Q96J87 481 aaKnown RBP22.4■■□□□ 1.18
PDLIM3-203ENST00000284771 FAM50BQ9Y247 325 aa22.4■■□□□ 1.18
PDLIM3-203ENST00000284771 HEY1Q9Y5J3 304 aa22.4■■□□□ 1.18
PDLIM3-203ENST00000284771 APOC4-APOC2K7ER74 178 aa22.39■■□□□ 1.18
PDLIM3-203ENST00000284771 LUC7L3O95232 432 aaKnown RBP22.39■■□□□ 1.18
PDLIM3-203ENST00000284771 APOC2P02655 101 aa22.39■■□□□ 1.18
PDLIM3-203ENST00000284771 AFMIDQ63HM1 303 aa22.39■■□□□ 1.18
PDLIM3-203ENST00000284771 CARNMT1Q8N4J0 409 aa22.39■■□□□ 1.18
PDLIM3-203ENST00000284771 TTC8Q8TAM2 541 aa22.39■■□□□ 1.18
PDLIM3-203ENST00000284771 ACTL9Q8TC94 416 aa22.39■■□□□ 1.18
PDLIM3-203ENST00000284771 LRRN4Q8WUT4 740 aa22.39■■□□□ 1.18
PDLIM3-203ENST00000284771 CHFRQ96EP1 664 aa22.39■■□□□ 1.18
PDLIM3-203ENST00000284771 LRRC19Q9H756 370 aa22.39■■□□□ 1.18
PDLIM3-203ENST00000284771 A0A0D9SEW6 157 aa22.39■■□□□ 1.17
PDLIM3-203ENST00000284771 CYBBP04839 570 aa22.39■■□□□ 1.17
PDLIM3-203ENST00000284771 NUMBP49757 651 aa22.39■■□□□ 1.17
PDLIM3-203ENST00000284771 OTUD4Q01804 1114 aaKnown RBP22.39■■□□□ 1.17
PDLIM3-203ENST00000284771 RUNX3Q13761 415 aa22.39■■□□□ 1.17
PDLIM3-203ENST00000284771 ASTLQ6HA08 431 aaPredicted RBP22.39■■□□□ 1.17
PDLIM3-203ENST00000284771 C12orf40Q86WS4 652 aa22.39■■□□□ 1.17
PDLIM3-203ENST00000284771 NAT16Q8N8M0 369 aa22.39■■□□□ 1.17
PDLIM3-203ENST00000284771 PRELID2Q8N945 189 aa22.39■■□□□ 1.17
PDLIM3-203ENST00000284771 ATG4AQ8WYN0 398 aa22.39■■□□□ 1.17
PDLIM3-203ENST00000284771 SLC39A8Q9C0K1 460 aa22.39■■□□□ 1.17
PDLIM3-203ENST00000284771 RETREG1Q9H6L5 497 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms