RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 RPS6KL1Q9Y6S9 549 aa18.4■□□□□ 0.54
CAPN1-201ENST00000279247 ARHGEF37A1IGU5 675 aa18.39■□□□□ 0.54
CAPN1-201ENST00000279247 ARHGAP42A6NI28 874 aa18.39■□□□□ 0.54
CAPN1-201ENST00000279247 SDR42E2A6NKP2 422 aa18.39■□□□□ 0.54
CAPN1-201ENST00000279247 ALDH2P05091 517 aa18.39■□□□□ 0.54
CAPN1-201ENST00000279247 SLC11A1P49279 550 aa18.39■□□□□ 0.54
CAPN1-201ENST00000279247 PARP6Q2NL67 630 aa18.39■□□□□ 0.54
CAPN1-201ENST00000279247 FBXW10Q5XX13 1052 aa18.39■□□□□ 0.54
CAPN1-201ENST00000279247 RSPO2Q6UXX9 243 aaPredicted RBP18.39■□□□□ 0.54
CAPN1-201ENST00000279247 TAS1R1Q7RTX1 841 aa18.39■□□□□ 0.54
CAPN1-201ENST00000279247 TTC16Q8NEE8 873 aa18.39■□□□□ 0.54
CAPN1-201ENST00000279247 IRGQQ8WZA9 623 aa18.39■□□□□ 0.54
CAPN1-201ENST00000279247 PGAP3Q96FM1 320 aaPredicted RBP18.39■□□□□ 0.54
CAPN1-201ENST00000279247 CRISPLD1Q9H336 500 aa18.39■□□□□ 0.54
CAPN1-201ENST00000279247 CCDC195A0A1B0GUA6 201 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 TUBP50607 506 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 ARHGEF6Q15052 776 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 BANPQ8N9N5 519 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 MECRQ9BV79 373 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 RASSF4Q9H2L5 321 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 RRN3Q9NYV6 651 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 KANSL3Q9P2N6 904 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 SQORQ9Y6N5 450 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 CCT8L1PA6NM43 557 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 SPAG6O75602 509 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 KRT37O76014 449 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 MT-CYBP00156 380 aaPredicted RBP18.39■□□□□ 0.53
CAPN1-201ENST00000279247 CD68P34810 354 aaPredicted RBP18.39■□□□□ 0.53
CAPN1-201ENST00000279247 SERPINB6P35237 376 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 MAGEA6P43360 314 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 DUSP4Q13115 394 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 CERCAMQ5T4B2 595 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 C4orf22Q6V702 233 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 FAM126BQ8IXS8 530 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 NUP93Q8N1F7 819 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 RMDN2Q96LZ7 410 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 TSEN34Q9BSV6 310 aaKnown RBP18.39■□□□□ 0.53
CAPN1-201ENST00000279247 FRMD8Q9BZ67 464 aaPredicted RBP18.39■□□□□ 0.53
CAPN1-201ENST00000279247 ZCWPW1Q9H0M4 648 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 ATXN3LQ9H3M9 355 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 SAGE1Q9NXZ1 904 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 PCDHB5Q9Y5E4 795 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 PSAT1Q9Y617 370 aa18.39■□□□□ 0.53
CAPN1-201ENST00000279247 COPEO14579 308 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 SUN1O94901 812 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 MAGEA3P43357 314 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 FAM189BP81408 668 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 RTP2Q5QGT7 225 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 TTC39BQ5VTQ0 682 aaPredicted RBP18.38■□□□□ 0.53
CAPN1-201ENST00000279247 PPCSQ9HAB8 311 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 WBP1LQ9NX94 342 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 DCTN4Q9UJW0 460 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 PCDHA11Q9Y5I1 949 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 SCN5AQ14524 2016 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 OAZ2O95190 189 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 C1QAP02745 245 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 SNRPAP09012 282 aaKnown RBP18.38■□□□□ 0.53
CAPN1-201ENST00000279247 MX2P20592 715 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 CYP2C18P33260 490 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 MAGEA9P43362 315 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 PPIDQ08752 370 aaKnown RBP18.38■□□□□ 0.53
CAPN1-201ENST00000279247 PSMD5Q16401 504 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 TRPM8Q7Z2W7 1104 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 PTPRN2Q92932 1015 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 FBXO32Q969P5 355 aa18.38■□□□□ 0.53
CAPN1-201ENST00000279247 ZNF669Q96BR6 464 aaPredicted RBP18.38■□□□□ 0.53
CAPN1-201ENST00000279247 NEBLO76041 1014 aa18.37■□□□□ 0.53
CAPN1-201ENST00000279247 AIF1P55008 147 aa18.37■□□□□ 0.53
CAPN1-201ENST00000279247 BFSP2Q13515 415 aa18.37■□□□□ 0.53
CAPN1-201ENST00000279247 LRRC8BQ6P9F7 803 aa18.37■□□□□ 0.53
CAPN1-201ENST00000279247 RNF19BQ6ZMZ0 732 aa18.37■□□□□ 0.53
CAPN1-201ENST00000279247 ATPAF2Q8N5M1 289 aa18.37■□□□□ 0.53
CAPN1-201ENST00000279247 ARNTL2Q8WYA1 636 aa18.37■□□□□ 0.53
CAPN1-201ENST00000279247 ZNF75CPQ92670 426 aaPredicted RBP18.37■□□□□ 0.53
CAPN1-201ENST00000279247 FTHL17Q9BXU8 183 aa18.37■□□□□ 0.53
CAPN1-201ENST00000279247 VWA8A3KMH1 1905 aa18.37■□□□□ 0.53
CAPN1-201ENST00000279247 NFE2Q16621 373 aaPredicted RBP18.37■□□□□ 0.53
CAPN1-201ENST00000279247 CIR1Q86X95 450 aaPredicted RBP18.37■□□□□ 0.53
CAPN1-201ENST00000279247 CCT6BQ92526 530 aa18.37■□□□□ 0.53
CAPN1-201ENST00000279247 CASD1Q96PB1 797 aa18.37■□□□□ 0.53
CAPN1-201ENST00000279247 SRPK1Q96SB4 655 aaKnown RBP18.37■□□□□ 0.53
CAPN1-201ENST00000279247 GORASP1Q9BQQ3 440 aa18.37■□□□□ 0.53
CAPN1-201ENST00000279247 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.37■□□□□ 0.53
CAPN1-201ENST00000279247 TAF10Q12962 218 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 CRYMQ14894 314 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 PDK4Q16654 411 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 TEX44Q53QW1 395 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 C10orf120Q5SQS8 335 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 ZNF280DQ6N043 979 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 FUT10Q6P4F1 479 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 NDUFAF2Q8N183 169 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 SLC43A3Q8NBI5 491 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 ARMC2Q8NEN0 867 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 IPMKQ8NFU5 416 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 SEPT8Q92599 483 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 AZIN2Q96A70 460 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 LRRC39Q96DD0 335 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 MFSD3Q96ES6 412 aa18.36■□□□□ 0.53
CAPN1-201ENST00000279247 MLPHQ9BV36 600 aaPredicted RBP18.36■□□□□ 0.53
CAPN1-201ENST00000279247 SLC39A8Q9C0K1 460 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms