RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 NFKB1P19838 968 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 CHRM3P20309 590 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 HADHAP40939 763 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 GPD2P43304 727 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 SLC39A12Q504Y0 691 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 SH3D19Q5HYK7 790 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 UBAP2Q5T6F2 1119 aaKnown RBP14.66□□□□□ -0.06
TMEM47-201ENST00000275954 ECHDC2Q86YB7 292 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 B3GALT6Q96L58 329 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 CSPG4P5Q96PW8 444 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 PCDHGC3Q9UN70 934 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 CDYLQ9Y232 598 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 AAR2Q9Y312 384 aaKnown RBP14.66□□□□□ -0.06
TMEM47-201ENST00000275954 IPPQ9Y573 584 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 H0YGN5 161 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 GSTA4O15217 222 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 EDF1O60869 148 aaKnown RBP14.66□□□□□ -0.06
TMEM47-201ENST00000275954 TFE3P19532 575 aaPredicted RBP14.66□□□□□ -0.06
TMEM47-201ENST00000275954 MATKP42679 507 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 NAGLUP54802 743 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 NCALDP61601 193 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 FAM83EQ2M2I3 478 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 C6orf10Q5SRN2 563 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 DEFB107AQ8IZN7 70 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 SDCCAG3Q96C92 435 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 HERPUD2Q9BSE4 406 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 DMAP1Q9NPF5 467 aaPredicted RBP14.66□□□□□ -0.06
TMEM47-201ENST00000275954 LATS2Q9NRM7 1088 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 ACTL7BQ9Y614 415 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 NFS1Q9Y697 457 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 PMM2O15305 246 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 LYPLA1O75608 230 aaPredicted RBP14.66□□□□□ -0.06
TMEM47-201ENST00000275954 SLC10A3P09131 477 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 TCHHL1Q5QJ38 904 aaPredicted RBP14.66□□□□□ -0.06
TMEM47-201ENST00000275954 CACUL1Q86Y37 369 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 SUGP1Q8IWZ8 645 aaKnown RBP14.66□□□□□ -0.06
TMEM47-201ENST00000275954 RFWD2Q8NHY2 731 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 MS4A4AQ96JQ5 239 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 KCNK16Q96T55 309 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 MRPL1Q9BYD6 325 aaKnown RBP14.66□□□□□ -0.06
TMEM47-201ENST00000275954 RNF39Q9H2S5 420 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 DCLRE1BQ9H816 532 aa14.66□□□□□ -0.06
TMEM47-201ENST00000275954 TNRC6CQ9HCJ0 1690 aaKnown RBP14.65□□□□□ -0.06
TMEM47-201ENST00000275954 PSMD3O43242 534 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 DNAJC8O75937 253 aaPredicted RBP14.65□□□□□ -0.06
TMEM47-201ENST00000275954 FGFR1P11362 822 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 GEMP55040 296 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 CDH17Q12864 832 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 VEPH1Q14D04 833 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 CNGA3Q16281 694 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 CCDC185Q8N715 623 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 ZNF670Q9BS34 389 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 GPAMQ9HCL2 828 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 SPATS2LQ9NUQ6 558 aaKnown RBP14.65□□□□□ -0.06
TMEM47-201ENST00000275954 PADI3Q9ULW8 664 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 STARD13Q9Y3M8 1113 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 SUPT3HB4E1H0 165 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 SUPT3HO75486 399 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 SEC24DO94855 1032 aaPredicted RBP14.65□□□□□ -0.06
TMEM47-201ENST00000275954 FOXN2P32314 431 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 SCNN1BP51168 640 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 WDR4P57081 412 aaKnown RBP14.65□□□□□ -0.06
TMEM47-201ENST00000275954 KPNB1Q14974 876 aaKnown RBP14.65□□□□□ -0.06
TMEM47-201ENST00000275954 ZRANB3Q5FWF4 1079 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 PCDH19Q8TAB3 1148 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 USP13Q92995 863 aaPredicted RBP14.65□□□□□ -0.06
TMEM47-201ENST00000275954 CDHR5Q9HBB8 845 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 THAP1Q9NVV9 213 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 SFMBT1Q9UHJ3 866 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 TLL2Q9Y6L7 1015 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 ABCA3Q99758 1704 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 C2CD4BA6NLJ0 364 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 AP3B1O00203 1094 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 PGAM1P18669 254 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 MAXP61244 160 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 PTP4A2Q12974 167 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 RBBP7Q16576 425 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 SGO1Q5FBB7 561 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 TRMT10BQ6PF06 316 aaKnown RBP14.65□□□□□ -0.06
TMEM47-201ENST00000275954 VSTM1Q6UX27 236 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 ALYREFQ86V81 257 aaKnown RBP14.65□□□□□ -0.06
TMEM47-201ENST00000275954 ZDHHC14Q8IZN3 488 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 SNX10Q9Y5X0 201 aa14.65□□□□□ -0.06
TMEM47-201ENST00000275954 RHOBTB1O94844 696 aa14.64□□□□□ -0.07
TMEM47-201ENST00000275954 PIRTP0C851 137 aa14.64□□□□□ -0.07
TMEM47-201ENST00000275954 GRIA1P42261 906 aa14.64□□□□□ -0.07
TMEM47-201ENST00000275954 CDK16Q00536 496 aa14.64□□□□□ -0.07
TMEM47-201ENST00000275954 MARC1Q5VT66 337 aa14.64□□□□□ -0.07
TMEM47-201ENST00000275954 SEL1L3Q68CR1 1132 aa14.64□□□□□ -0.07
TMEM47-201ENST00000275954 LRRC52Q8N7C0 313 aa14.64□□□□□ -0.07
TMEM47-201ENST00000275954 CATSPER2Q96P56 530 aa14.64□□□□□ -0.07
TMEM47-201ENST00000275954 OMDQ99983 421 aa14.64□□□□□ -0.07
TMEM47-201ENST00000275954 BTBD10Q9BSF8 475 aa14.64□□□□□ -0.07
TMEM47-201ENST00000275954 CAB39LQ9H9S4 337 aa14.64□□□□□ -0.07
TMEM47-201ENST00000275954 ENTPD7Q9NQZ7 604 aa14.64□□□□□ -0.07
TMEM47-201ENST00000275954 ARHGAP26Q9UNA1 814 aa14.64□□□□□ -0.07
TMEM47-201ENST00000275954 SRRM3A6NNA2 597 aaPredicted RBP14.64□□□□□ -0.07
TMEM47-201ENST00000275954 DUSP11O75319 330 aaKnown RBP14.64□□□□□ -0.07
TMEM47-201ENST00000275954 F7P08709 466 aaPredicted RBP14.64□□□□□ -0.07
TMEM47-201ENST00000275954 OR4Q2P0C623 313 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms