RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 CYP2S1Q96SQ9 504 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 FERMT1Q9BQL6 677 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 CORO1BQ9BR76 489 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 NKX2-4Q9H2Z4 354 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 ZNF212Q9UDV6 495 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 ATP8A1Q9Y2Q0 1164 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 SMAPO00193 183 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 RFPL2O75678 378 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 CORO1AP31146 461 aaKnown RBP23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 SLC6A4P31645 630 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 ZNF33AQ06730 810 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 WASHC5Q12768 1159 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 ALFQ53S48 1182 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 FAM182AQ5T1J6 154 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 ANKRD22Q5VYY1 191 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 DENND1CQ8IV53 801 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 ARL14EPQ8N8R7 260 aaPredicted RBP23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 WBP2Q969T9 261 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 MYEOVQ96EZ4 313 aa23.51■■□□□ 1.35
SMARCB1-201ENST00000263121 ATG2AQ2TAZ0 1938 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 RNF103O00237 685 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 NRG2O14511 850 aaPredicted RBP23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 CNTN5O94779 1100 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 STK10O94804 968 aaKnown RBP23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 HDCP19113 662 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 BASP1P80723 227 aaKnown RBP23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 KCNJ11Q14654 390 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 RAB30Q15771 203 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 ANKRD20A2Q5SQ80 823 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 ANKRD20A1Q5TYW2 823 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 ANKRD20A3Q5VUR7 823 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 IQCKQ8N0W5 287 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 UMODL1-AS1Q8N2C9 162 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 TAB3Q8N5C8 712 aaPredicted RBP23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 PWWP2AQ96N64 755 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 RPRD1AQ96P16 312 aaPredicted RBP23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 TSGA13Q96PP4 275 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 GCNAQ96QF7 691 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 SLC39A8Q9C0K1 460 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 CERS4Q9HA82 394 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 RAB6BQ9NRW1 208 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 HCFC1R1Q9NWW0 138 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 DONSONQ9NYP3 566 aa23.5■■□□□ 1.35
SMARCB1-201ENST00000263121 F5H5T6 163 aa23.49■■□□□ 1.35
SMARCB1-201ENST00000263121 HNRNPA1P09651 372 aaKnown RBP eCLIP23.49■■□□□ 1.35
SMARCB1-201ENST00000263121 MYL4P12829 197 aa23.49■■□□□ 1.35
SMARCB1-201ENST00000263121 PFKLP17858 780 aa23.49■■□□□ 1.35
SMARCB1-201ENST00000263121 MAGEA6P43360 314 aa23.49■■□□□ 1.35
SMARCB1-201ENST00000263121 PMS2P54278 862 aa23.49■■□□□ 1.35
SMARCB1-201ENST00000263121 ALS2CLQ60I27 953 aa23.49■■□□□ 1.35
SMARCB1-201ENST00000263121 ADAMTS19Q8TE59 1207 aa23.49■■□□□ 1.35
SMARCB1-201ENST00000263121 DEPDC1BQ8WUY9 529 aa23.49■■□□□ 1.35
SMARCB1-201ENST00000263121 LMAN2LQ9H0V9 348 aa23.49■■□□□ 1.35
SMARCB1-201ENST00000263121 ATXN3LQ9H3M9 355 aa23.49■■□□□ 1.35
SMARCB1-201ENST00000263121 NOL6Q9H6R4 1146 aaKnown RBP23.49■■□□□ 1.35
SMARCB1-201ENST00000263121 SMPD4Q9NXE4 827 aa23.49■■□□□ 1.35
SMARCB1-201ENST00000263121 MSRAQ9UJ68 235 aa23.49■■□□□ 1.35
SMARCB1-201ENST00000263121 AGO1Q9UL18 857 aaKnown RBP23.49■■□□□ 1.35
SMARCB1-201ENST00000263121 A0A1W2PRU2 124 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 TCRBV7S3A2A0A539 114 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 PER2O15055 1255 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 CHADO15335 359 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 MTSS1O43312 755 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 OPHN1O60890 802 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 FGF19O95750 216 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 LATS1O95835 1130 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 IRF1P10914 325 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 NDST2P52849 883 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 SLC7A9P82251 487 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 PPP2R2DQ66LE6 453 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 TFAP2DQ7Z6R9 452 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 ADGRD2Q7Z7M1 963 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 CCDC25Q86WR0 208 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 CCDC13Q8IYE1 715 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 LGI2Q8N0V4 545 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 EPB41L4BQ9H329 900 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 ACBD3Q9H3P7 528 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 STOML2Q9UJZ1 356 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 DFFAO00273 331 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 GREM1O60565 184 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 TMEM63AO94886 807 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 METTL18O95568 372 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 POU2F2P09086 479 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 PTPN2P17706 415 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 PTPN3P26045 913 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 CCR2P41597 374 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 SMAD3P84022 425 aaKnown RBP23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 ZXDBP98169 803 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 CFAP58Q5T655 872 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 ARHGEF18Q6ZSZ5 1173 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 CEP128Q6ZU80 1094 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 RELL1Q8IUW5 271 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 ZNF567Q8N184 647 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 MAB21L3Q8N8X9 362 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 UBLCP1Q8WVY7 318 aaPredicted RBP23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 PABPC3Q9H361 631 aaKnown RBP23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 RETREG1Q9H6L5 497 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 ETNK1Q9HBU6 452 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 SEPT10Q9P0V9 454 aa23.48■■□□□ 1.35
SMARCB1-201ENST00000263121 DNMT3BQ9UBC3 853 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms