RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 RPRD1AQ96P16 312 aaPredicted RBP13.36□□□□□ -0.27
VAMP7-201ENST00000262640 CORO1BQ9BR76 489 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 PBX4Q9BYU1 374 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 LMAN2LQ9H0V9 348 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 RETREG1Q9H6L5 497 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 RAB6BQ9NRW1 208 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 GOLGA6BA6NDN3 693 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 CHADO15335 359 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 LATS1O95835 1130 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 HDCP19113 662 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 CORO1AP31146 461 aaKnown RBP13.36□□□□□ -0.27
VAMP7-201ENST00000262640 CHKAP35790 457 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 NDST2P52849 883 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 GPS2Q13227 327 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 C5orf22Q49AR2 442 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 TXNDC8Q6A555 127 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 DENND1CQ8IV53 801 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 CCDC13Q8IYE1 715 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 UMODL1-AS1Q8N2C9 162 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 UBLCP1Q8WVY7 318 aaPredicted RBP13.36□□□□□ -0.27
VAMP7-201ENST00000262640 IGSF8Q969P0 613 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 TSGA13Q96PP4 275 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 DDX50Q9BQ39 737 aaKnown RBP13.36□□□□□ -0.27
VAMP7-201ENST00000262640 ATXN3LQ9H3M9 355 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 GKN1Q9NS71 199 aa13.36□□□□□ -0.27
VAMP7-201ENST00000262640 GOLGA6L7A0A1B0GV03 622 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 DFFAO00273 331 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 MYL4P12829 197 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 EPCAMP16422 314 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 EPHA5P54756 1037 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 CYP4F8P98187 520 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 UAP1Q16222 522 aaPredicted RBP13.35□□□□□ -0.27
VAMP7-201ENST00000262640 FAM133BQ5BKY9 247 aaKnown RBP13.35□□□□□ -0.27
VAMP7-201ENST00000262640 ANKRD20A2Q5SQ80 823 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 ANKRD20A1Q5TYW2 823 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 ANKRD20A3Q5VUR7 823 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 TRMT10CQ7L0Y3 403 aaKnown RBP13.35□□□□□ -0.27
VAMP7-201ENST00000262640 LGI2Q8N0V4 545 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 IQCKQ8N0W5 287 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 ATPAF2Q8N5M1 289 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 ARL14EPQ8N8R7 260 aaPredicted RBP13.35□□□□□ -0.27
VAMP7-201ENST00000262640 ZFRQ96KR1 1074 aaKnown RBP13.35□□□□□ -0.27
VAMP7-201ENST00000262640 PHACTR1Q9C0D0 580 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 NKX2-4Q9H2Z4 354 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 FAM53CQ9NYF3 392 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 SEPT10Q9P0V9 454 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 XYLBO75191 536 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 KLKB1P03952 638 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 POU2F2P09086 479 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 IRF1P10914 325 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 PTPN2P17706 415 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 CCNCP24863 283 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 FDFT1P37268 417 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 MAGEA6P43360 314 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 MAPKAPK2P49137 400 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 SMAD3P84022 425 aaKnown RBP13.35□□□□□ -0.27
VAMP7-201ENST00000262640 WASHC5Q12768 1159 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 KCNJ11Q14654 390 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 RABGAP1LQ5R372 815 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 PPP2R2DQ66LE6 453 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 RELL1Q8IUW5 271 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 TAB3Q8N5C8 712 aaPredicted RBP13.35□□□□□ -0.27
VAMP7-201ENST00000262640 LEMD2Q8NC56 503 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 SLC22A12Q96S37 553 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 CYP2S1Q96SQ9 504 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 VAT1Q99536 393 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 SLC39A8Q9C0K1 460 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 PABPC3Q9H361 631 aaKnown RBP13.35□□□□□ -0.27
VAMP7-201ENST00000262640 ZDHHC7Q9NXF8 308 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 GBF1Q92538 1859 aa13.35□□□□□ -0.27
VAMP7-201ENST00000262640 TRAV19A0A0A6YYK7 116 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 RFPL2O75678 378 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 CNTN5O94779 1100 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 SLC6A4P31645 630 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 IRAK1P51617 712 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 SLC7A9P82251 487 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 ALFQ53S48 1182 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 ADGRF1Q5T601 910 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 ANKRD22Q5VYY1 191 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 PPP1R21Q6ZMI0 780 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 TFAP2DQ7Z6R9 452 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 EXOC4Q96A65 974 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 RBM15Q96T37 977 aaKnown RBP eCLIP13.34□□□□□ -0.27
VAMP7-201ENST00000262640 RUFY1Q96T51 708 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 FRMD8Q9BZ67 464 aaPredicted RBP13.34□□□□□ -0.27
VAMP7-201ENST00000262640 NDFIP2Q9NV92 336 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 SMPD4Q9NXE4 827 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 STOML2Q9UJZ1 356 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 TRHDEQ9UKU6 1024 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 AGO1Q9UL18 857 aaKnown RBP13.34□□□□□ -0.27
VAMP7-201ENST00000262640 CPQQ9Y646 472 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 A0A1W2PRU2 124 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 PTPN3P26045 913 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 DDX6P26196 483 aaKnown RBP eCLIP13.34□□□□□ -0.27
VAMP7-201ENST00000262640 ARL4CP56559 192 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 LRIG3Q6UXM1 1119 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 ZNF567Q8N184 647 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 MAB21L3Q8N8X9 362 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 ZIM3Q96PE6 472 aa13.34□□□□□ -0.27
VAMP7-201ENST00000262640 CERS4Q9HA82 394 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms