RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 EGFL8Q99944 293 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 SLC25A23Q9BV35 468 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 A0A1B0GVG6 124 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 SUPT3HB4E1H0 165 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 MTSS1O43312 755 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 SLC18A1P54219 525 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 DMC1Q14565 340 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 POU6F1Q14863 301 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 ZIK1Q3SY52 487 aaPredicted RBP16.54■□□□□ 0.24
SREBF1-201ENST00000261646 CCDC80Q76M96 950 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 METTL23Q86XA0 190 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 P3H2Q8IVL5 708 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 BRSK2Q8IWQ3 736 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 DCPSQ96C86 337 aaKnown RBP16.54■□□□□ 0.24
SREBF1-201ENST00000261646 C17orf80Q9BSJ5 609 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 RTKNQ9BST9 563 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 ACE2Q9BYF1 805 aaPredicted RBP16.54■□□□□ 0.24
SREBF1-201ENST00000261646 TRUB2O95900 331 aaKnown RBP16.54■□□□□ 0.24
SREBF1-201ENST00000261646 CD48P09326 243 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 SUPT20HL2P0C7V6 817 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 FCGR1AP12314 374 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 GRIA4P48058 902 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 GAD2Q05329 585 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 SUPT20HL1Q3ZLR7 823 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 ZC3H12AQ5D1E8 599 aaKnown RBP16.54■□□□□ 0.24
SREBF1-201ENST00000261646 FNIP1Q8TF40 1166 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 PABPC5Q96DU9 382 aaKnown RBP16.54■□□□□ 0.24
SREBF1-201ENST00000261646 MFSD14AQ96MC6 490 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 EPB41L4BQ9H329 900 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 NOL11Q9H8H0 719 aaKnown RBP16.54■□□□□ 0.24
SREBF1-201ENST00000261646 RAB26Q9ULW5 256 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 CNTNAP2Q9UHC6 1331 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 DCAF8L1A6NGE4 600 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 DPEP1P16444 411 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 ACAT1P24752 427 aaKnown RBP16.53■□□□□ 0.24
SREBF1-201ENST00000261646 NDST1P52848 882 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 PGM5Q15124 567 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 KIZQ2M2Z5 673 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 SFT2D3Q587I9 215 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 PPM1JQ5JR12 505 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 TMEM63BQ5T3F8 832 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 PACS1Q6VY07 963 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 FAM156AQ8NDB6 213 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 URGCPQ8TCY9 931 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 CALML6Q8TD86 181 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 CCDC126Q96EE4 140 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 CERS2Q96G23 380 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 C1orf50Q9BV19 199 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 MYOZ2Q9NPC6 264 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 TRNAU1APQ9NX07 287 aaKnown RBP16.53■□□□□ 0.24
SREBF1-201ENST00000261646 HACD3Q9P035 362 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 TMA7Q9Y2S6 64 aaKnown RBP16.53■□□□□ 0.24
SREBF1-201ENST00000261646 PSMD3O43242 534 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 VAPBO95292 243 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 PSMB9P28065 219 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 EFCAB12Q6NXP0 572 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 XRRA1Q6P2D8 792 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 TRAF7Q6Q0C0 670 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 DPP9Q86TI2 863 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 BORCS5Q969J3 196 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.53■□□□□ 0.246e-7■■■■■ 44.6
SREBF1-201ENST00000261646 OMDQ99983 421 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 IDI2Q9BXS1 227 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 HMG20AQ9NP66 347 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 ITGB1BP2Q9UKP3 347 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 SATB2Q9UPW6 733 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 LRCH4O75427 683 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 MFN2O95140 757 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 BNIPLQ7Z465 357 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 NETO2Q8NC67 525 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 ZFYVE19Q96K21 471 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 DNAJB4Q9UDY4 337 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 PPME1Q9Y570 386 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 PCDHA11Q9Y5I1 949 aa16.53■□□□□ 0.24
SREBF1-201ENST00000261646 YWHAZP63104 245 aaKnown RBP16.52■□□□□ 0.24
SREBF1-201ENST00000261646 TMEM62Q0P6H9 643 aa16.52■□□□□ 0.24
SREBF1-201ENST00000261646 KLHDC10Q6PID8 442 aa16.52■□□□□ 0.24
SREBF1-201ENST00000261646 MPZL3Q6UWV2 235 aa16.52■□□□□ 0.24
SREBF1-201ENST00000261646 OR52K1Q8NGK4 314 aa16.52■□□□□ 0.24
SREBF1-201ENST00000261646 ADAM32Q8TC27 787 aa16.52■□□□□ 0.24
SREBF1-201ENST00000261646 ERLEC1Q96DZ1 483 aa16.52■□□□□ 0.24
SREBF1-201ENST00000261646 BDH2Q9BUT1 245 aa16.52■□□□□ 0.24
SREBF1-201ENST00000261646 SP110Q9HB58 689 aa16.52■□□□□ 0.24
SREBF1-201ENST00000261646 PXMP2Q9NR77 195 aa16.52■□□□□ 0.24
SREBF1-201ENST00000261646 DDIT4Q9NX09 232 aa16.52■□□□□ 0.24
SREBF1-201ENST00000261646 RBMX2Q9Y388 322 aaKnown RBP16.52■□□□□ 0.24
SREBF1-201ENST00000261646 ARFGEF2Q9Y6D5 1785 aa16.52■□□□□ 0.24
SREBF1-201ENST00000261646 TIPRLO75663 272 aa16.52■□□□□ 0.24
SREBF1-201ENST00000261646 UNGP13051 313 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-201ENST00000261646 CDH2P19022 906 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-201ENST00000261646 UGCGQ16739 394 aa16.52■□□□□ 0.24
SREBF1-201ENST00000261646 NBPF12Q5TAG4 269 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-201ENST00000261646 SCN4BQ8IWT1 228 aa16.52■□□□□ 0.24
SREBF1-201ENST00000261646 ZNF280CQ8ND82 737 aa16.52■□□□□ 0.24
SREBF1-201ENST00000261646 UTP4Q969X6 686 aaKnown RBP16.52■□□□□ 0.24
SREBF1-201ENST00000261646 CDH19Q9H159 772 aa16.52■□□□□ 0.24
SREBF1-201ENST00000261646 SNX15Q9NRS6 342 aa16.52■□□□□ 0.24
SREBF1-201ENST00000261646 NDUFAF1Q9Y375 327 aa16.52■□□□□ 0.24
SREBF1-201ENST00000261646 C5P01031 1676 aa16.52■□□□□ 0.23
SREBF1-201ENST00000261646 ATP6AP2A0A1C7CYW4 349 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms