RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 IGSF8Q969P0 613 aa11.96□□□□□ -0.5
LIN28A-201ENST00000254231 RMDN1Q96DB5 314 aa11.96□□□□□ -0.5
LIN28A-201ENST00000254231 TRAIPQ9BWF2 469 aa11.96□□□□□ -0.5
LIN28A-201ENST00000254231 KLC2Q9H0B6 622 aa11.96□□□□□ -0.5
LIN28A-201ENST00000254231 FBXO44Q9H4M3 255 aa11.96□□□□□ -0.5
LIN28A-201ENST00000254231 WDR70Q9NW82 654 aa11.96□□□□□ -0.5
LIN28A-201ENST00000254231 TXNDC16Q9P2K2 825 aa11.96□□□□□ -0.5
LIN28A-201ENST00000254231 HCFC2Q9Y5Z7 792 aa11.96□□□□□ -0.5
LIN28A-201ENST00000254231 FBXO21O94952 628 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 VIMP08670 466 aaKnown RBP11.95□□□□□ -0.5
LIN28A-201ENST00000254231 HAPLN1P10915 354 aaPredicted RBP11.95□□□□□ -0.5
LIN28A-201ENST00000254231 NFKB1P19838 968 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 HECTD3Q5T447 861 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 FAM171BQ6P995 826 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 ZDHHC24Q6UX98 284 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 LDB1Q86U70 411 aaPredicted RBP11.95□□□□□ -0.5
LIN28A-201ENST00000254231 EXT2Q93063 718 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 PPP1R36Q96LQ0 422 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 CWH43Q9H720 699 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 FZD10Q9ULW2 581 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 SH3BP1Q9Y3L3 701 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 INSL6Q9Y581 213 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 HS3ST4Q9Y661 456 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 DAB1O75553 588 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 MGAT1P26572 445 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 PCK1P35558 622 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 GABRB2P47870 512 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 HNRNPH2P55795 449 aaKnown RBP11.95□□□□□ -0.5
LIN28A-201ENST00000254231 GNGT1P63211 74 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 NCBP2-AS2Q69YL0 99 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 PPP1R2P3Q6NXS1 205 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 FBXL22Q6P050 247 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 GET4Q7L5D6 327 aaPredicted RBP11.95□□□□□ -0.5
LIN28A-201ENST00000254231 RPAINQ86UA6 219 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 HERC6Q8IVU3 1022 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 FLCNQ8NFG4 579 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 MRPS31Q92665 395 aaKnown RBP11.95□□□□□ -0.5
LIN28A-201ENST00000254231 ZCWPW1Q9H0M4 648 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 LRRC19Q9H756 370 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 IL23AQ9NPF7 189 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 AAASQ9NRG9 546 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 MTMR10Q9NXD2 777 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 CFAP97Q9P2B7 532 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 VPS28Q9UK41 221 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 FBXW11Q9UKB1 542 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 MYO10Q9HD67 2058 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 TARSL2A2RTX5 802 aaKnown RBP11.95□□□□□ -0.5
LIN28A-201ENST00000254231 E9PAM4 449 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 COCHO43405 550 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 OAZ2O95190 189 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 VIPR2P41587 438 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 TUFMP49411 452 aaKnown RBP11.95□□□□□ -0.5
LIN28A-201ENST00000254231 CDH18Q13634 790 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 SLMAPQ14BN4 828 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 ANKRD20A2Q5SQ80 823 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 TMEM240Q5SV17 173 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 CERCAMQ5T4B2 595 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 ANKRD20A1Q5TYW2 823 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 ANKRD20A3Q5VUR7 823 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 CHRDL2Q6WN34 429 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 FAM47EQ6ZV65 393 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 CENPUQ71F23 418 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 SPATA6LQ8N4H0 392 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 BLOC1S5Q8TDH9 187 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 SLC39A8Q9C0K1 460 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 BRD8Q9H0E9 1235 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 TLE6Q9H808 572 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 SAMD15Q9P1V8 674 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 ZC3H7BQ9UGR2 993 aaKnown RBP11.95□□□□□ -0.5
LIN28A-201ENST00000254231 FIS1Q9Y3D6 152 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 ZFP37Q9Y6Q3 630 aaPredicted RBP11.95□□□□□ -0.5
LIN28A-201ENST00000254231 TRANK1O15050 2925 aa11.95□□□□□ -0.5
LIN28A-201ENST00000254231 FAM187AA6NFU0 413 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 HHLA1C9JL84 531 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 SNAP91O60641 907 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 UGT1A9O60656 530 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 AGTP01019 485 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 VAV1P15498 845 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 KLF1Q13351 362 aaPredicted RBP11.94□□□□□ -0.5
LIN28A-201ENST00000254231 PPP2R2DQ66LE6 453 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 ELMOD1Q8N336 334 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 ALLCQ8N6M5 410 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 TTC13Q8NBP0 860 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 SPPL2BQ8TCT7 592 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 CPT1BQ92523 772 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 AZIN2Q96A70 460 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 UGT1A7Q9HAW7 530 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 UGT1A10Q9HAW8 530 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 UGT1A8Q9HAW9 530 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 SARS2Q9NP81 518 aaKnown RBP11.94□□□□□ -0.5
LIN28A-201ENST00000254231 IPO11Q9UI26 975 aaKnown RBP11.94□□□□□ -0.5
LIN28A-201ENST00000254231 CFAP54Q96N23 3096 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 F5H5T6 163 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 SYN3O14994 580 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 TRIM66O15016 1216 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 OPA1O60313 960 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 GLUD1P00367 558 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 BMP1P13497 986 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 FNTAP49354 379 aa11.94□□□□□ -0.5
LIN28A-201ENST00000254231 ERFP50548 548 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms