RNA–Protein interactions for RNA: ENST00000229251.7

COPS7A-201, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-201ENST00000229251 CYS1Q717R9 158 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 CCNJLQ8IV13 435 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 SRRM1Q8IYB3 904 aaKnown RBP13.49□□□□□ -0.25
COPS7A-201ENST00000229251 ABI1Q8IZP0 508 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 CYP4X1Q8N118 509 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 SP7Q8TDD2 431 aaPredicted RBP13.49□□□□□ -0.25
COPS7A-201ENST00000229251 SEPT8Q92599 483 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 HDAC11Q96DB2 347 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 C8orf48Q96LL4 319 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 SMC6Q96SB8 1091 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 VAT1Q99536 393 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 MRPL9Q9BYD2 267 aaKnown RBP13.49□□□□□ -0.25
COPS7A-201ENST00000229251 SMOC2Q9H3U7 446 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 IGSF9Q9P2J2 1179 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 TBK1Q9UHD2 729 aa13.49□□□□□ -0.25
COPS7A-201ENST00000229251 GREB1Q4ZG55 1949 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 SYNJ2BP-COX16A0A087WUM0 186 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 POC1B-GALNT4F8VUJ3 575 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 IRAK2O43187 625 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 CREB3O43889 395 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 FAM155BO75949 473 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 AMHP03971 560 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 VAV1P15498 845 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 ERCC2P18074 760 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 KRT15P19012 456 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 DRD4P21917 467 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 SLC5A3P53794 718 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 NRLP54845 237 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 HTRA4P83105 476 aaPredicted RBP13.48□□□□□ -0.25
COPS7A-201ENST00000229251 PPIDQ08752 370 aaKnown RBP13.48□□□□□ -0.25
COPS7A-201ENST00000229251 ELAVL2Q12926 359 aaKnown RBP13.48□□□□□ -0.25
COPS7A-201ENST00000229251 GPM6BQ13491 265 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 PPP2R5DQ14738 602 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 PARP6Q2NL67 630 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 CPLX4Q7Z7G2 160 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 SRLQ86TD4 932 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 TAC4Q86UU9 113 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 CAND1Q86VP6 1230 aaKnown RBP13.48□□□□□ -0.25
COPS7A-201ENST00000229251 ZNF280BQ86YH2 543 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 RNF135Q8IUD6 432 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 ARHGAP18Q8N392 663 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 DQX1Q8TE96 717 aaKnown RBP13.48□□□□□ -0.25
COPS7A-201ENST00000229251 FBF1Q8TES7 1133 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 DYDC1Q8WWB3 177 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 PBXIP1Q96AQ6 731 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 P2RY11Q96G91 374 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 HAPLN3Q96S86 360 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 PAFAH2Q99487 392 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 NAT9Q9BTE0 207 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 FBXO44Q9H4M3 255 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 ARHGEF38Q9NXL2 777 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 COX16Q9P0S2 106 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 ZNF180Q9UJW8 692 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 CHMP2BQ9UQN3 213 aa13.48□□□□□ -0.25
COPS7A-201ENST00000229251 COL4A6Q14031 1691 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 TCRBV9S1A1TA0A576 114 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 ERI2A8K979 691 aaKnown RBP13.47□□□□□ -0.25
COPS7A-201ENST00000229251 RNF103O00237 685 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 METTL18O95568 372 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 PRKCHP24723 683 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 MSH2P43246 934 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 OR1G1P47890 313 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 YWHAGP61981 247 aaKnown RBP eCLIP13.47□□□□□ -0.25
COPS7A-201ENST00000229251 NRG1Q02297 640 aaPredicted RBP13.47□□□□□ -0.25
COPS7A-201ENST00000229251 TCF15Q12870 199 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 IER5LQ5T953 404 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 ZNF280DQ6N043 979 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 SLC44A1Q8WWI5 657 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 PRMT1Q99873 361 aaKnown RBP13.47□□□□□ -0.25
COPS7A-201ENST00000229251 TMEM175Q9BSA9 504 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 RHOBTB2Q9BYZ6 727 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 TKTL2Q9H0I9 626 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 TRABDQ9H4I3 376 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 KCNK9Q9NPC2 374 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 FNIP2Q9P278 1114 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 OR12D3Q9UGF7 316 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 ZC3H7BQ9UGR2 993 aaKnown RBP13.47□□□□□ -0.25
COPS7A-201ENST00000229251 ADAM28Q9UKQ2 775 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 SCML2Q9UQR0 700 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 IKBKGQ9Y6K9 419 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 MYO7AQ13402 2215 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 IQANK1A0A1B0GTG1 560 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 TMEM221A6NGB7 291 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 M0R296 226 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 ENPP3O14638 875 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 FGF10O15520 208 aaPredicted RBP13.47□□□□□ -0.25
COPS7A-201ENST00000229251 B4GALT3O60512 393 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 TADA2AO75478 443 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 BANF1O75531 89 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 MAP3K6O95382 1288 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 HOXC13P31276 330 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 GRIK1P39086 918 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 GALNT2Q10471 571 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 AP1B1Q10567 949 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 MRPL58Q14197 206 aaKnown RBP13.47□□□□□ -0.25
COPS7A-201ENST00000229251 TCTN1Q2MV58 587 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 HP1BP3Q5SSJ5 553 aaPredicted RBP13.47□□□□□ -0.25
COPS7A-201ENST00000229251 ACBD5Q5T8D3 534 aaPredicted RBP13.47□□□□□ -0.25
COPS7A-201ENST00000229251 BTBD8Q5XKL5 378 aa13.47□□□□□ -0.25
COPS7A-201ENST00000229251 MSANTD2Q6P1R3 559 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms