RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 IL23RQ5VWK5 629 aa14.44□□□□□ -0.1
SF1-201ENST00000227503 DCAF15Q66K64 600 aa14.44□□□□□ -0.1
SF1-201ENST00000227503 TMEM198Q66K66 360 aa14.44□□□□□ -0.1
SF1-201ENST00000227503 TICAM1Q8IUC6 712 aa14.44□□□□□ -0.1
SF1-201ENST00000227503 RCN3Q96D15 328 aa14.44□□□□□ -0.1
SF1-201ENST00000227503 ACO2Q99798 780 aaKnown RBP14.44□□□□□ -0.1
SF1-201ENST00000227503 COQ10BQ9H8M1 238 aa14.44□□□□□ -0.1
SF1-201ENST00000227503 CPSF3Q9UKF6 684 aaKnown RBP14.44□□□□□ -0.1
SF1-201ENST00000227503 SEC24DO94855 1032 aaPredicted RBP14.43□□□□□ -0.1
SF1-201ENST00000227503 FARP2O94887 1054 aaPredicted RBP14.43□□□□□ -0.1
SF1-201ENST00000227503 HOXC6P09630 235 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 CRHR1P34998 444 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 GJA8P48165 433 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 OLFML1Q6UWY5 402 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 FAM110BQ8TC76 370 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 CCDC97Q96F63 343 aaPredicted RBP14.43□□□□□ -0.1
SF1-201ENST00000227503 MAML3Q96JK9 1138 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 TMEM79Q9BSE2 394 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 TCHPQ9BT92 498 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 MRPL4Q9BYD3 311 aaKnown RBP14.43□□□□□ -0.1
SF1-201ENST00000227503 NRBP2Q9NSY0 501 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 PLK2Q9NYY3 685 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 ARHGEF37A1IGU5 675 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 C19orf81C9J6K1 198 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 OGTO15294 1046 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 KRT38O76015 456 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 APOEP02649 317 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 OCM2P0CE71 109 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 OCMP0CE72 109 aaPredicted RBP14.43□□□□□ -0.1
SF1-201ENST00000227503 GSTT2P0CG29 244 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 GSTT2BP0CG30 244 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 ZNF23P17027 643 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 OSBPP22059 807 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 PGGT1BP53609 377 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 ROR1Q01973 937 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 PDAP1Q13442 181 aaKnown RBP14.43□□□□□ -0.1
SF1-201ENST00000227503 PRAMEF18Q5VWM3 479 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 MICALL2Q8IY33 904 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 DSELQ8IZU8 1212 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 DNERQ8NFT8 737 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 C12orf43Q96C57 262 aaKnown RBP14.43□□□□□ -0.1
SF1-201ENST00000227503 TMA16Q96EY4 203 aaKnown RBP14.43□□□□□ -0.1
SF1-201ENST00000227503 CAMKK2Q96RR4 588 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 SLC29A1Q99808 456 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 BRD8Q9H0E9 1235 aa14.43□□□□□ -0.1
SF1-201ENST00000227503 SLC15A5A6NIM6 579 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 ATE1O95260 518 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 ZBTB11O95625 1053 aaPredicted RBP14.42□□□□□ -0.1
SF1-201ENST00000227503 KRT3P12035 628 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 PHKA2P46019 1235 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 EFNA5P52803 228 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 EN1Q05925 392 aaPredicted RBP14.42□□□□□ -0.1
SF1-201ENST00000227503 DQX1Q8TE96 717 aaKnown RBP14.42□□□□□ -0.1
SF1-201ENST00000227503 NLRP4Q96MN2 994 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 SLC4A5Q9BY07 1137 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 SLC2A11Q9BYW1 496 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 FRMD8P1Q9BZ68 369 aaPredicted RBP14.42□□□□□ -0.1
SF1-201ENST00000227503 NAA50Q9GZZ1 169 aaKnown RBP14.42□□□□□ -0.1
SF1-201ENST00000227503 TMEM216Q9P0N5 145 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 STK39Q9UEW8 545 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 PSAT1Q9Y617 370 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 PSMD12O00232 456 aaPredicted RBP14.42□□□□□ -0.1
SF1-201ENST00000227503 ALDOAP04075 364 aaKnown RBP14.42□□□□□ -0.1
SF1-201ENST00000227503 KRT7P08729 469 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 RPS12P25398 132 aaKnown RBP14.42□□□□□ -0.1
SF1-201ENST00000227503 STAT5BP51692 787 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 TFAMQ00059 246 aaKnown RBP14.42□□□□□ -0.1
SF1-201ENST00000227503 TRPC3Q13507 836 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 ZNF699Q32M78 642 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 CCDC92Q53HC0 331 aaPredicted RBP14.42□□□□□ -0.1
SF1-201ENST00000227503 BSPRYQ5W0U4 402 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 KRT80Q6KB66 452 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 KCNT2Q6UVM3 1135 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 CHERPQ8IWX8 916 aaKnown RBP14.42□□□□□ -0.1
SF1-201ENST00000227503 SLC7A5P1Q8MH63 180 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 FNIP1Q8TF40 1166 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 LRTOMTQ8WZ04 291 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 PPP1R14BQ96C90 147 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 PCDHAC1Q9H158 963 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 LHX5Q9H2C1 402 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 GPATCH2LQ9NWQ4 482 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 SPATA7Q9P0W8 599 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 THEGQ9P2T0 379 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 TRIM17Q9Y577 477 aa14.42□□□□□ -0.1
SF1-201ENST00000227503 A0A1W2PPW3 197 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 ZFXP17010 805 aaPredicted RBP14.41□□□□□ -0.1
SF1-201ENST00000227503 RBL1P28749 1068 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 RPL26P61254 145 aaKnown RBP14.41□□□□□ -0.1
SF1-201ENST00000227503 MGAT5BQ3V5L5 792 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 LGSNQ5TDP6 509 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 MFSD4BQ5TF39 518 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 BORAQ6PGQ7 559 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 NAPRTQ6XQN6 538 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 CMC1Q7Z7K0 106 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 NETO2Q8NC67 525 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 ISOC1Q96CN7 298 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 CIB1Q99828 191 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 HEPHQ9BQS7 1158 aa14.41□□□□□ -0.1
SF1-201ENST00000227503 GCOM2Q9BZD3 368 aaPredicted RBP14.41□□□□□ -0.1
SF1-201ENST00000227503 TBCCD1Q9NVR7 557 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms