RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ECM1Q16610 540 aa18.83■□□□□ 0.6
CLIP2-201ENST00000223398 DNAJC19Q96DA6 116 aa18.83■□□□□ 0.6
CLIP2-201ENST00000223398 FAM50BQ9Y247 325 aa18.83■□□□□ 0.6
CLIP2-201ENST00000223398 ZSCAN5DPP0CG00 497 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 KRT20P35900 424 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 ANXA11P50995 505 aaKnown RBP18.82■□□□□ 0.6
CLIP2-201ENST00000223398 CHPFQ8IZ52 775 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 FBXO39Q8N4B4 442 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 MCOLN3Q8TDD5 553 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 GRM5P41594 1212 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 NPY2RP49146 381 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 N4BP2L1Q5TBK1 243 aaPredicted RBP18.82■□□□□ 0.6
CLIP2-201ENST00000223398 IRAK1BP1Q5VVH5 260 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 GET4Q7L5D6 327 aaPredicted RBP18.82■□□□□ 0.6
CLIP2-201ENST00000223398 PPP1R10Q96QC0 940 aaKnown RBP18.82■□□□□ 0.6
CLIP2-201ENST00000223398 TTPALQ9BTX7 342 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 CAAP1Q9H8G2 361 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 EXOSC4Q9NPD3 245 aaKnown RBP18.82■□□□□ 0.6
CLIP2-201ENST00000223398 RAD51BO15315 384 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 PPP1R11O60927 126 aaPredicted RBP18.82■□□□□ 0.6
CLIP2-201ENST00000223398 FGBP02675 491 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 PLK1P53350 603 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 SNRPD1P62314 119 aaKnown RBP18.82■□□□□ 0.6
CLIP2-201ENST00000223398 CARNS1A5YM72 827 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 ZSCAN5CA6NGD5 496 aaPredicted RBP18.82■□□□□ 0.6
CLIP2-201ENST00000223398 AP5Z1O43299 807 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 PRLRP16471 622 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 PRKCZQ05513 592 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 HSD17B14Q9BPX1 270 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 PRKD2Q9BZL6 878 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 IKZF4Q9H2S9 585 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 RHBGQ9H310 441 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 MRGBPQ9NV56 204 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 ZNF112Q9UJU3 913 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 DNALI1O14645 258 aaPredicted RBP18.82■□□□□ 0.6
CLIP2-201ENST00000223398 RASSF9O75901 435 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 PSMB4P28070 264 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 MAMLD1Q13495 774 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 RAET1GQ6H3X3 334 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 ANKRD52Q8NB46 1076 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 AVENQ9NQS1 362 aaPredicted RBP18.82■□□□□ 0.6
CLIP2-201ENST00000223398 PADI3Q9ULW8 664 aa18.82■□□□□ 0.6
CLIP2-201ENST00000223398 SMIM35A0A1B0GVV1 85 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 ZNF682O95780 498 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 CRADDP78560 199 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 CDHR5Q9HBB8 845 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 CHST7Q9NS84 486 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 C2CD2Q9Y426 696 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 NEURL4Q96JN8 1562 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 CCL16O15467 120 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 TLR5O60602 858 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 CCNE2O96020 404 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 PCBP1Q15365 356 aaKnown RBP eCLIP18.81■□□□□ 0.6
CLIP2-201ENST00000223398 ATP13A4Q4VNC1 1196 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 DAB2IPQ5VWQ8 1189 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 CENPLQ8N0S6 344 aaPredicted RBP18.81■□□□□ 0.6
CLIP2-201ENST00000223398 PARVBQ9HBI1 364 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 PLK2Q9NYY3 685 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 ZMYND8Q9ULU4 1186 aaPredicted RBP18.81■□□□□ 0.6
CLIP2-201ENST00000223398 GPSM3Q9Y4H4 160 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 CNTNAP1P78357 1384 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 CNTFP26441 200 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 SERPINH1P50454 418 aaKnown RBP18.81■□□□□ 0.6
CLIP2-201ENST00000223398 ABHD15Q6UXT9 468 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 NLRP9Q7RTR0 991 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 MTFMTQ96DP5 389 aaKnown RBP18.81■□□□□ 0.6
CLIP2-201ENST00000223398 CAMKK2Q96RR4 588 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 KBTBD12Q3ZCT8 623 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 ALFQ53S48 1182 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 NOL9Q5SY16 702 aaKnown RBP18.81■□□□□ 0.6
CLIP2-201ENST00000223398 PPP1R26Q5T8A7 1209 aaPredicted RBP18.81■□□□□ 0.6
CLIP2-201ENST00000223398 GAS2L1Q99501 681 aaPredicted RBP18.81■□□□□ 0.6
CLIP2-201ENST00000223398 KLC4Q9NSK0 619 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 GTF2A1LQ9UNN4 478 aa18.81■□□□□ 0.6
CLIP2-201ENST00000223398 SIGLEC16A6NMB1 481 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 INHAP05111 366 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 ETS1P14921 441 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 RPL21P46778 160 aaKnown RBP18.8■□□□□ 0.6
CLIP2-201ENST00000223398 SNRNP25Q9BV90 132 aaKnown RBP18.8■□□□□ 0.6
CLIP2-201ENST00000223398 KRT6AP02538 564 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 KRT6BP04259 564 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 PIRTP0C851 137 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 GP5P40197 560 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 KRT6CP48668 564 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 LRRC8DQ7L1W4 858 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 SLAIN1Q8ND83 568 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 ZYG11BQ9C0D3 744 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 HACD1B0YJ81 288 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 APOC4-APOC2K7ER74 178 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 FGF10O15520 208 aaPredicted RBP18.8■□□□□ 0.6
CLIP2-201ENST00000223398 APOC2P02655 101 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 GLUD2P49448 558 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 HSPA14Q0VDF9 509 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 ITGA9Q13797 1035 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 OR52K1Q8NGK4 314 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 MAML3Q96JK9 1138 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 ZNHIT2Q9UHR6 403 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 CASZ1Q86V15 1759 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 TRPC1P48995 793 aa18.8■□□□□ 0.6
CLIP2-201ENST00000223398 MAXP61244 160 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms