RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 FAM171A1Q5VUB5 890 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 LHX8Q68G74 356 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 THOC7Q6I9Y2 204 aaKnown RBP9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 LRRTM3Q86VH5 581 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 TEX9Q8N6V9 391 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 ZMIZ2Q8NF64 920 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 OR10T2Q8NGX3 314 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 CLIP3Q96DZ5 547 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 SCLYQ96I15 445 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 ZNF570Q96NI8 536 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 SERPINB12Q96P63 405 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 LGMNQ99538 433 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 TSEN34Q9BSV6 310 aaKnown RBP9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 UBE2OQ9C0C9 1292 aaKnown RBP9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 TBC1D13Q9NVG8 400 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 FGFR1OP2Q9NVK5 253 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 KANSL3Q9P2N6 904 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 GGT7Q9UJ14 662 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 FZD10Q9ULW2 581 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 BRCA2P51587 3418 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 C9IYK1 514 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 RASA4BC9J798 803 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 RASA4O43374 803 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 AVILO75366 819 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 TMCC1O94876 653 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 BRAFP15056 766 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 HOXD11P31277 338 aaPredicted RBP9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 PBX3P40426 434 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 CCNG1P51959 295 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 ARPC4P59998 168 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 BLMHQ13867 455 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 MBTPS1Q14703 1052 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 CTXN3Q4LDR2 81 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 ANKRD20A2Q5SQ80 823 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 FNBP1LQ5T0N5 605 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 ANKRD20A1Q5TYW2 823 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 ANKRD20A3Q5VUR7 823 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 PPP1R21Q6ZMI0 780 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 NCCRP1Q6ZVX7 275 aaPredicted RBP9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 LIMS2Q7Z4I7 341 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 TFB1MQ8WVM0 346 aaKnown RBP9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 SEPT8Q92599 483 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 B3GALT6Q96L58 329 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 TKTL2Q9H0I9 626 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 TMEM30AQ9NV96 361 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 NKIRAS1Q9NYS0 192 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 TMED5Q9Y3A6 229 aa9.15□□□□□ -0.95
MTHFD1-201ENST00000216605 RALGAPA2Q2PPJ7 1873 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 PRSS47A8MTI9 375 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 TMEM63AO94886 807 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 ENDOD1O94919 500 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 OAS1P00973 400 aaKnown RBP9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 PENKP01210 267 aaPredicted RBP9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 KRT16P08779 473 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 MSL3P1P0C860 447 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 EPHB2P29323 1055 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 GATMP50440 423 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 NKX3-2P78367 333 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 DMPKQ09013 629 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 TAZQ16635 292 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 TNFAIP8L3Q5GJ75 292 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 DENND5BQ6ZUT9 1274 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 PDZD4Q76G19 769 aaPredicted RBP9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 EXOC3L1Q86VI1 746 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 DCP1BQ8IZD4 617 aaKnown RBP9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 KIF2BQ8N4N8 673 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 GDAP1Q8TB36 358 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 GPR152Q8TDT2 470 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 SUSD3Q96L08 255 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 NPY6RQ99463 290 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 FTHL17Q9BXU8 183 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 ETNK1Q9HBU6 452 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 QPCTLQ9NXS2 382 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 ZFATQ9P243 1243 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 ATXN10Q9UBB4 475 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 SNX10Q9Y5X0 201 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 A6NHS1 94 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 TBKBP1A7MCY6 615 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 ALDH2P05091 517 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 ADRA1BP35368 520 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 SKIV2L2P42285 1042 aaKnown RBP9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 PHEXP78562 749 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 PDAP1Q13442 181 aaKnown RBP9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 TAF11Q15544 211 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 DDR2Q16832 855 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 SLC45A4Q5BKX6 768 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 FAM26DQ5JW98 314 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 CLLU1OSQ5K130 101 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 SLC9A4Q6AI14 798 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 PID1Q7Z2X4 250 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 ANKK1Q8NFD2 765 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 FBF1Q8TES7 1133 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 CENPIQ92674 756 aaPredicted RBP9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 ARHGEF4Q9NR80 690 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 TMCO1Q9UM00 188 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 MAGED2Q9UNF1 606 aaPredicted RBP9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 TMEM120BA0PK00 339 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 SPAG7O75391 227 aa9.14□□□□□ -0.95
MTHFD1-201ENST00000216605 ATP5HO75947 161 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms