RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PHACTR1Q9C0D0 580 aa20.22■□□□□ 0.83
TNFRSF1A-201ENST00000162749 NDFIP2Q9NV92 336 aa20.22■□□□□ 0.83
TNFRSF1A-201ENST00000162749 MPP6Q9NZW5 540 aa20.22■□□□□ 0.83
TNFRSF1A-201ENST00000162749 SSX2IPQ9Y2D8 614 aa20.22■□□□□ 0.83
TNFRSF1A-201ENST00000162749 CHD5Q8TDI0 1954 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 TGM5O43548 720 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 MAGEA6P43360 314 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 PPARDQ03181 441 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 MSS51Q4VC12 460 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 FNBP1LQ5T0N5 605 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 ARHGEF18Q6ZSZ5 1173 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 TMC7Q7Z402 723 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 DNAJB7Q7Z6W7 309 aaPredicted RBP20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 ZBED8Q8IZ13 594 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 TLCD1Q96CP7 247 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 FERMT1Q9BQL6 677 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 ALG13Q9NP73 1137 aaKnown RBP20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 DNMT3LQ9UJW3 386 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 MAFFQ9ULX9 164 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 KCNK1O00180 336 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 BANF1O75531 89 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 APRTP07741 180 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 ARL4CP56559 192 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 MAGOHP61326 146 aaKnown RBP20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 PDIA2Q13087 525 aaKnown RBP20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 AUHQ13825 339 aaKnown RBP20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 HP1BP3Q5SSJ5 553 aaPredicted RBP20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 HECTD3Q5T447 861 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 KLHDC10Q6PID8 442 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 TADA2BQ86TJ2 420 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 ARFGAP2Q8N6H7 521 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 PSMG2Q969U7 264 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 BRD8Q9H0E9 1235 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 EPN3Q9H201 632 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 TRPM5Q9NZQ8 1165 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 SEPT10Q9P0V9 454 aa20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 HBS1LQ9Y450 684 aaKnown RBP20.21■□□□□ 0.83
TNFRSF1A-201ENST00000162749 E7ESA3 106 aa20.2■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ALOX15BO15296 676 aa20.2■□□□□ 0.82
TNFRSF1A-201ENST00000162749 COCHO43405 550 aa20.2■□□□□ 0.82
TNFRSF1A-201ENST00000162749 OPHN1O60890 802 aa20.2■□□□□ 0.82
TNFRSF1A-201ENST00000162749 KCNQ1P51787 676 aa20.2■□□□□ 0.82
TNFRSF1A-201ENST00000162749 KPNA1P52294 538 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF1A-201ENST00000162749 MTM1Q13496 603 aa20.2■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ARHGAP12Q8IWW6 846 aa20.2■□□□□ 0.82
TNFRSF1A-201ENST00000162749 RTL3Q8N8U3 475 aaKnown RBP20.2■□□□□ 0.82
TNFRSF1A-201ENST00000162749 DEPDC1BQ8WUY9 529 aa20.2■□□□□ 0.82
TNFRSF1A-201ENST00000162749 MYO1CO00159 1063 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 STK10O94804 968 aaKnown RBP20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 CXCL14O95715 111 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 BMPR1AP36894 532 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 EPHB3P54753 998 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 NUGGCQ68CJ6 796 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 CCDC13Q8IYE1 715 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 PDIK1LQ8N165 341 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ZNF567Q8N184 647 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 DPF3Q92784 378 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 TCF25Q9BQ70 676 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 NACA2Q9H009 215 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 IGLV3-10A0A075B6K4 115 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 CTNNB1P35222 781 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 SEC24CP53992 1094 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ERVFC1P60507 584 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 PPP2R2AP63151 447 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 TMEM150AQ86TG1 271 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 NLRP14Q86W24 1093 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 LZTR1Q8N653 840 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 SERPINB12Q96P63 405 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 PRMT1Q99873 361 aaKnown RBP20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 WDR83Q9BRX9 315 aaKnown RBP20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 IRAK3Q9Y616 596 aa20.19■□□□□ 0.82
TNFRSF1A-201ENST00000162749 PTPN3P26045 913 aa20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 SEMA5AQ13591 1074 aa20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 RAP1GAP2Q684P5 730 aa20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 FBXL22Q6P050 247 aa20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 LILRA6Q6PI73 481 aa20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 PPARGC1AQ9UBK2 798 aaKnown RBP20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 WASH4PA8MWX3 477 aa20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ANKRD65E5RJM6 399 aa20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 NDUFAB1O14561 156 aa20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ZNF189O75820 626 aaPredicted RBP20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 OAS1P00973 400 aaKnown RBP20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ADH1AP07327 375 aa20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 SPRED2Q7Z698 418 aa20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 TTC25Q96NG3 672 aa20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 TMEM109Q9BVC6 243 aa20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ZYG11BQ9C0D3 744 aa20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 RNF38Q9H0F5 515 aa20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 UXTQ9UBK9 157 aaPredicted RBP20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 LZTS1Q9Y250 596 aa20.18■□□□□ 0.82
TNFRSF1A-201ENST00000162749 C2orf78A6NCI8 922 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 DFFAO00273 331 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 CSPG5O95196 566 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 PPP3CCP48454 512 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 NADSYN1Q6IA69 706 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 PPP1R21Q6ZMI0 780 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ARHGAP36Q6ZRI8 547 aa20.17■□□□□ 0.82
TNFRSF1A-201ENST00000162749 ANKMY2Q8IV38 441 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms